Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.56■□□□□ 0.72
Hoxa6P09092 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa6P09092 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa6P09092 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hoxa6P09092 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa6P09092 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.55■□□□□ 0.72
Hoxa6P09092 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa6P09092 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.55■□□□□ 0.72
Hoxa6P09092 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa6P09092 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa6P09092 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa6P09092 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa6P09092 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa6P09092 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.53■□□□□ 0.72
Hoxa6P09092 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa6P09092 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa6P09092 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa6P09092 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa6P09092 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxa6P09092 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Hoxa6P09092 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa6P09092 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.51■□□□□ 0.71
Hoxa6P09092 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa6P09092 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hoxa6P09092 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa6P09092 Gm27502-201ENSMUST00000183495 199 ntBASIC19.5■□□□□ 0.71
Hoxa6P09092 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hoxa6P09092 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxa6P09092 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa6P09092 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa6P09092 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa6P09092 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Hoxa6P09092 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa6P09092 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxa6P09092 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Hoxa6P09092 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxa6P09092 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Hoxa6P09092 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxa6P09092 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.47■□□□□ 0.71
Hoxa6P09092 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxa6P09092 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa6P09092 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa6P09092 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxa6P09092 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.45■□□□□ 0.7
Hoxa6P09092 Gm44428-201ENSMUST00000204474 874 ntBASIC19.45■□□□□ 0.7
Hoxa6P09092 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.45■□□□□ 0.7
Hoxa6P09092 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa6P09092 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa6P09092 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxa6P09092 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa6P09092 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hoxa6P09092 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxa6P09092 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.44■□□□□ 0.7
Hoxa6P09092 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa6P09092 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa6P09092 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxa6P09092 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hoxa6P09092 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.43■□□□□ 0.7
Hoxa6P09092 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hoxa6P09092 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa6P09092 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.42■□□□□ 0.7
Hoxa6P09092 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa6P09092 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa6P09092 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa6P09092 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa6P09092 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxa6P09092 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.41■□□□□ 0.7
Hoxa6P09092 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa6P09092 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa6P09092 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa6P09092 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa6P09092 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxa6P09092 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxa6P09092 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa6P09092 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa6P09092 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxa6P09092 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.39■□□□□ 0.69
Hoxa6P09092 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa6P09092 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa6P09092 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxa6P09092 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa6P09092 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa6P09092 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa6P09092 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa6P09092 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa6P09092 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa6P09092 Gm10420-201ENSMUST00000121713 882 ntBASIC19.37■□□□□ 0.69
Hoxa6P09092 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa6P09092 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa6P09092 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hoxa6P09092 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa6P09092 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.36■□□□□ 0.69
Hoxa6P09092 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hoxa6P09092 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms