Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ERCC1P07992 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ERCC1P07992 AP002414.2-202ENST00000590929 1450 ntBASIC21.94■■□□□ 1.1
ERCC1P07992 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ERCC1P07992 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.94■■□□□ 1.1
ERCC1P07992 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ERCC1P07992 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.93■■□□□ 1.1
ERCC1P07992 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.92■■□□□ 1.1
ERCC1P07992 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ERCC1P07992 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC1P07992 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC1P07992 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ERCC1P07992 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.91■■□□□ 1.1
ERCC1P07992 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC1P07992 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ERCC1P07992 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC1P07992 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ERCC1P07992 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ERCC1P07992 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC1P07992 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC1P07992 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ERCC1P07992 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ERCC1P07992 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ERCC1P07992 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.89■■□□□ 1.09
ERCC1P07992 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.89■■□□□ 1.09
ERCC1P07992 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.89■■□□□ 1.09
ERCC1P07992 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC1P07992 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC1P07992 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.88■■□□□ 1.09
ERCC1P07992 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC1P07992 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC1P07992 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC1P07992 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.87■■□□□ 1.09
ERCC1P07992 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ERCC1P07992 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC1P07992 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.87■■□□□ 1.09
ERCC1P07992 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ERCC1P07992 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC1P07992 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC1P07992 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC1P07992 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ERCC1P07992 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC1P07992 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.84■■□□□ 1.09
ERCC1P07992 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC1P07992 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC1P07992 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.84■■□□□ 1.09
ERCC1P07992 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ERCC1P07992 AC135731.1-201ENST00000569415 2548 ntBASIC21.83■■□□□ 1.09
ERCC1P07992 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC1P07992 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC1P07992 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ERCC1P07992 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ERCC1P07992 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ERCC1P07992 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
ERCC1P07992 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
ERCC1P07992 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.83■■□□□ 1.08
ERCC1P07992 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ERCC1P07992 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC1P07992 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ERCC1P07992 AC135983.2-203ENST00000454486 1613 ntBASIC21.82■■□□□ 1.08
ERCC1P07992 AC008813.1-201ENST00000536597 885 ntBASIC21.82■■□□□ 1.08
ERCC1P07992 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
ERCC1P07992 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC1P07992 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ERCC1P07992 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.81■■□□□ 1.08
ERCC1P07992 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC1P07992 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.81■■□□□ 1.08
ERCC1P07992 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ERCC1P07992 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC1P07992 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC1P07992 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ERCC1P07992 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.8■■□□□ 1.08
ERCC1P07992 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.8■■□□□ 1.08
ERCC1P07992 AC018358.1-201ENST00000631079 1402 ntBASIC21.8■■□□□ 1.08
ERCC1P07992 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.79■■□□□ 1.08
ERCC1P07992 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ERCC1P07992 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.79■■□□□ 1.08
ERCC1P07992 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.79■■□□□ 1.08
ERCC1P07992 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.78■■□□□ 1.08
ERCC1P07992 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ERCC1P07992 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC1P07992 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC1P07992 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC1P07992 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ERCC1P07992 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
ERCC1P07992 WHAMMP2-203ENST00000563942 1603 ntBASIC21.77■■□□□ 1.07
ERCC1P07992 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC1P07992 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.76■■□□□ 1.07
ERCC1P07992 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC1P07992 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.76■■□□□ 1.07
ERCC1P07992 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ERCC1P07992 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms