Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 WHAMMP2-203ENST00000563942 1603 ntBASIC20.63■□□□□ 0.89
CTSDP07339 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.63■□□□□ 0.89
CTSDP07339 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
CTSDP07339 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSDP07339 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTSDP07339 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.62■□□□□ 0.89
CTSDP07339 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CTSDP07339 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTSDP07339 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.62■□□□□ 0.89
CTSDP07339 AP004609.3-201ENST00000610705 1884 ntBASIC20.62■□□□□ 0.89
CTSDP07339 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSDP07339 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSDP07339 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSDP07339 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTSDP07339 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.61■□□□□ 0.89
CTSDP07339 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.61■□□□□ 0.89
CTSDP07339 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSDP07339 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTSDP07339 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CTSDP07339 AC093323.1-202ENST00000635031 2045 ntBASIC20.6■□□□□ 0.89
CTSDP07339 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTSDP07339 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTSDP07339 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.6■□□□□ 0.89
CTSDP07339 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CTSDP07339 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSDP07339 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSDP07339 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSDP07339 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSDP07339 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSDP07339 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSDP07339 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSDP07339 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSDP07339 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CTSDP07339 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CTSDP07339 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.58■□□□□ 0.88
CTSDP07339 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSDP07339 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSDP07339 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSDP07339 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSDP07339 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSDP07339 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSDP07339 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSDP07339 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSDP07339 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.57■□□□□ 0.88
CTSDP07339 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSDP07339 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSDP07339 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.56■□□□□ 0.88
CTSDP07339 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSDP07339 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSDP07339 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSDP07339 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTSDP07339 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.55■□□□□ 0.88
CTSDP07339 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSDP07339 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSDP07339 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSDP07339 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSDP07339 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSDP07339 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSDP07339 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSDP07339 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CTSDP07339 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSDP07339 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.53■□□□□ 0.88
CTSDP07339 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSDP07339 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSDP07339 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSDP07339 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSDP07339 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTSDP07339 MIR762-201ENST00000390236 83 ntBASIC20.52■□□□□ 0.88
CTSDP07339 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTSDP07339 AC097358.2-201ENST00000607541 1159 ntBASIC20.52■□□□□ 0.88
CTSDP07339 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CTSDP07339 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CTSDP07339 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.51■□□□□ 0.87
CTSDP07339 LINC00273-201ENST00000539813 1452 ntBASIC20.51■□□□□ 0.87
CTSDP07339 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSDP07339 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTSDP07339 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CTSDP07339 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSDP07339 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTSDP07339 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSDP07339 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.51■□□□□ 0.87
CTSDP07339 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CTSDP07339 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTSDP07339 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.51■□□□□ 0.87
CTSDP07339 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.5■□□□□ 0.87
CTSDP07339 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTSDP07339 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.5■□□□□ 0.87
CTSDP07339 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CTSDP07339 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSDP07339 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTSDP07339 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSDP07339 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.49■□□□□ 0.87
CTSDP07339 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CTSDP07339 AC142472.1-201ENST00000612013 1741 ntBASIC20.49■□□□□ 0.87
CTSDP07339 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTSDP07339 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTSDP07339 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CTSDP07339 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTSDP07339 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTSDP07339 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms