Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ERBB2P04626 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ERBB2P04626 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.34■■□□□ 1.81
ERBB2P04626 AC148477.6-201ENST00000623746 465 ntBASIC26.34■■□□□ 1.81
ERBB2P04626 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ERBB2P04626 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ERBB2P04626 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERBB2P04626 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
ERBB2P04626 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.32■■□□□ 1.8
ERBB2P04626 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERBB2P04626 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERBB2P04626 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.32■■□□□ 1.8
ERBB2P04626 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERBB2P04626 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERBB2P04626 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
ERBB2P04626 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ERBB2P04626 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ERBB2P04626 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.31■■□□□ 1.8
ERBB2P04626 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERBB2P04626 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ERBB2P04626 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERBB2P04626 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERBB2P04626 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ERBB2P04626 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ERBB2P04626 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
ERBB2P04626 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
ERBB2P04626 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.3■■□□□ 1.8
ERBB2P04626 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ERBB2P04626 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.29■■□□□ 1.8
ERBB2P04626 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
ERBB2P04626 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERBB2P04626 MIR639-201ENST00000384974 98 ntBASIC26.28■■□□□ 1.8
ERBB2P04626 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.28■■□□□ 1.8
ERBB2P04626 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
ERBB2P04626 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
ERBB2P04626 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERBB2P04626 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERBB2P04626 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERBB2P04626 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERBB2P04626 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ERBB2P04626 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
ERBB2P04626 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
ERBB2P04626 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.27■■□□□ 1.8
ERBB2P04626 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERBB2P04626 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERBB2P04626 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ERBB2P04626 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.26■■□□□ 1.79
ERBB2P04626 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERBB2P04626 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERBB2P04626 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.26■■□□□ 1.79
ERBB2P04626 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERBB2P04626 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ERBB2P04626 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ERBB2P04626 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ERBB2P04626 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
ERBB2P04626 AL449106.1-201ENST00000608517 1980 ntBASIC26.25■■□□□ 1.79
ERBB2P04626 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.24■■□□□ 1.79
ERBB2P04626 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.24■■□□□ 1.79
ERBB2P04626 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
ERBB2P04626 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ERBB2P04626 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.23■■□□□ 1.79
ERBB2P04626 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ERBB2P04626 WHAMMP3-201ENST00000611636 1609 ntBASIC26.22■■□□□ 1.79
ERBB2P04626 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.22■■□□□ 1.79
ERBB2P04626 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.22■■□□□ 1.79
ERBB2P04626 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
ERBB2P04626 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
ERBB2P04626 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.22■■□□□ 1.79
ERBB2P04626 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ERBB2P04626 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
ERBB2P04626 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ERBB2P04626 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ERBB2P04626 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
ERBB2P04626 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.19■■□□□ 1.78
ERBB2P04626 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ERBB2P04626 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.19■■□□□ 1.78
ERBB2P04626 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ERBB2P04626 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ERBB2P04626 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ERBB2P04626 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ERBB2P04626 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.17■■□□□ 1.78
ERBB2P04626 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ERBB2P04626 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.17■■□□□ 1.78
ERBB2P04626 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
ERBB2P04626 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.17■■□□□ 1.78
ERBB2P04626 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
ERBB2P04626 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ERBB2P04626 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
ERBB2P04626 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
ERBB2P04626 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
ERBB2P04626 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.15■■□□□ 1.78
ERBB2P04626 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
ERBB2P04626 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ERBB2P04626 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ERBB2P04626 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.14■■□□□ 1.78
ERBB2P04626 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ERBB2P04626 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ERBB2P04626 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ERBB2P04626 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ERBB2P04626 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms