Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TCRAP04437 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.9■□□□□ 0.62
TCRAP04437 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TCRAP04437 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRAP04437 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRAP04437 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TCRAP04437 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TCRAP04437 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRAP04437 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.88■□□□□ 0.61
TCRAP04437 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRAP04437 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TCRAP04437 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRAP04437 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.87■□□□□ 0.61
TCRAP04437 AP004609.3-201ENST00000610705 1884 ntBASIC18.87■□□□□ 0.61
TCRAP04437 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRAP04437 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.86■□□□□ 0.61
TCRAP04437 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
TCRAP04437 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRAP04437 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.86■□□□□ 0.61
TCRAP04437 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCRAP04437 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRAP04437 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.86■□□□□ 0.61
TCRAP04437 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.86■□□□□ 0.61
TCRAP04437 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRAP04437 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRAP04437 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.85■□□□□ 0.61
TCRAP04437 MIR762-201ENST00000390236 83 ntBASIC18.85■□□□□ 0.61
TCRAP04437 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TCRAP04437 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRAP04437 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRAP04437 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRAP04437 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TCRAP04437 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRAP04437 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRAP04437 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.84■□□□□ 0.61
TCRAP04437 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRAP04437 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TCRAP04437 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TCRAP04437 AC136428.2-201ENST00000563187 214 ntBASIC18.83■□□□□ 0.6
TCRAP04437 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TCRAP04437 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TCRAP04437 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRAP04437 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRAP04437 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRAP04437 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TCRAP04437 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRAP04437 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRAP04437 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRAP04437 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TCRAP04437 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRAP04437 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRAP04437 LINC00273-201ENST00000539813 1452 ntBASIC18.81■□□□□ 0.6
TCRAP04437 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRAP04437 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRAP04437 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRAP04437 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRAP04437 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TCRAP04437 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRAP04437 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.8■□□□□ 0.6
TCRAP04437 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRAP04437 AC097358.2-201ENST00000607541 1159 ntBASIC18.8■□□□□ 0.6
TCRAP04437 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.8■□□□□ 0.6
TCRAP04437 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRAP04437 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.79■□□□□ 0.6
TCRAP04437 AC093323.1-202ENST00000635031 2045 ntBASIC18.79■□□□□ 0.6
TCRAP04437 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRAP04437 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRAP04437 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRAP04437 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRAP04437 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRAP04437 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TCRAP04437 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRAP04437 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRAP04437 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRAP04437 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRAP04437 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.78■□□□□ 0.6
TCRAP04437 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRAP04437 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRAP04437 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRAP04437 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRAP04437 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRAP04437 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRAP04437 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TCRAP04437 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRAP04437 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms