Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CD3DP04234 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CD3DP04234 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.1■□□□□ 0.97
CD3DP04234 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.1■□□□□ 0.97
CD3DP04234 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.1■□□□□ 0.97
CD3DP04234 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.1■□□□□ 0.97
CD3DP04234 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD3DP04234 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CD3DP04234 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CD3DP04234 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD3DP04234 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD3DP04234 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD3DP04234 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CD3DP04234 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CD3DP04234 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
CD3DP04234 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CD3DP04234 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CD3DP04234 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD3DP04234 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CD3DP04234 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.07■□□□□ 0.96
CD3DP04234 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CD3DP04234 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CD3DP04234 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD3DP04234 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD3DP04234 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CD3DP04234 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD3DP04234 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD3DP04234 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD3DP04234 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD3DP04234 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD3DP04234 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CD3DP04234 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD3DP04234 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD3DP04234 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.04■□□□□ 0.96
CD3DP04234 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD3DP04234 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CD3DP04234 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CD3DP04234 AP004609.3-201ENST00000610705 1884 ntBASIC21.03■□□□□ 0.96
CD3DP04234 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD3DP04234 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CD3DP04234 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CD3DP04234 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD3DP04234 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CD3DP04234 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CD3DP04234 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.02■□□□□ 0.96
CD3DP04234 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD3DP04234 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CD3DP04234 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CD3DP04234 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.02■□□□□ 0.96
CD3DP04234 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CD3DP04234 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21■□□□□ 0.95
CD3DP04234 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CD3DP04234 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CD3DP04234 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CD3DP04234 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CD3DP04234 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD3DP04234 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD3DP04234 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CD3DP04234 AC135983.2-203ENST00000454486 1613 ntBASIC20.99■□□□□ 0.95
CD3DP04234 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CD3DP04234 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD3DP04234 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD3DP04234 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD3DP04234 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CD3DP04234 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CD3DP04234 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CD3DP04234 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.97■□□□□ 0.95
CD3DP04234 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.97■□□□□ 0.95
CD3DP04234 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD3DP04234 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD3DP04234 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CD3DP04234 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CD3DP04234 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.95■□□□□ 0.94
CD3DP04234 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3DP04234 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD3DP04234 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CD3DP04234 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CD3DP04234 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CD3DP04234 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.95■□□□□ 0.94
CD3DP04234 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CD3DP04234 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.94■□□□□ 0.94
CD3DP04234 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3DP04234 SETD8P1-201ENST00000623146 1180 ntBASIC20.94■□□□□ 0.94
CD3DP04234 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD3DP04234 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD3DP04234 ERN1-208ENST00000606895 2068 ntBASIC20.93■□□□□ 0.94
CD3DP04234 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD3DP04234 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.93■□□□□ 0.94
CD3DP04234 WHAMMP2-203ENST00000563942 1603 ntBASIC20.93■□□□□ 0.94
CD3DP04234 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD3DP04234 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CD3DP04234 RARRES2P7-201ENST00000567349 469 ntBASIC20.91■□□□□ 0.94
CD3DP04234 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3DP04234 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.9■□□□□ 0.94
CD3DP04234 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.9■□□□□ 0.94
CD3DP04234 AL391121.1-201ENST00000607967 1349 ntBASIC20.9■□□□□ 0.94
CD3DP04234 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD3DP04234 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CD3DP04234 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CD3DP04234 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms