Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hbb-b1P02088 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hbb-b1P02088 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hbb-b1P02088 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hbb-b1P02088 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hbb-b1P02088 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hbb-b1P02088 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hbb-b1P02088 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.15■□□□□ 0.18
Hbb-b1P02088 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hbb-b1P02088 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hbb-b1P02088 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hbb-b1P02088 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hbb-b1P02088 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hbb-b1P02088 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hbb-b1P02088 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hbb-b1P02088 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hbb-b1P02088 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hbb-b1P02088 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hbb-b1P02088 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hbb-b1P02088 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hbb-b1P02088 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hbb-b1P02088 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.1■□□□□ 0.17
Hbb-b1P02088 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.1■□□□□ 0.17
Hbb-b1P02088 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.1■□□□□ 0.17
Hbb-b1P02088 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hbb-b1P02088 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.1■□□□□ 0.17
Hbb-b1P02088 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hbb-b1P02088 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hbb-b1P02088 Notumos-201ENSMUST00000151998 2659 ntBASIC16.08■□□□□ 0.16
Hbb-b1P02088 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hbb-b1P02088 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hbb-b1P02088 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hbb-b1P02088 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hbb-b1P02088 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hbb-b1P02088 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.06■□□□□ 0.16
Hbb-b1P02088 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.06■□□□□ 0.16
Hbb-b1P02088 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hbb-b1P02088 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hbb-b1P02088 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hbb-b1P02088 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hbb-b1P02088 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.02■□□□□ 0.16
Hbb-b1P02088 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hbb-b1P02088 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hbb-b1P02088 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hbb-b1P02088 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hbb-b1P02088 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hbb-b1P02088 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hbb-b1P02088 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hbb-b1P02088 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hbb-b1P02088 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16■□□□□ 0.15
Hbb-b1P02088 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hbb-b1P02088 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hbb-b1P02088 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hbb-b1P02088 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16■□□□□ 0.15
Hbb-b1P02088 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hbb-b1P02088 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hbb-b1P02088 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hbb-b1P02088 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms