Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRACP01848 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRACP01848 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRACP01848 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRACP01848 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRACP01848 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.23■□□□□ 0.19
TRACP01848 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRACP01848 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRACP01848 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRACP01848 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRACP01848 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRACP01848 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRACP01848 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRACP01848 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRACP01848 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRACP01848 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRACP01848 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRACP01848 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRACP01848 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.21■□□□□ 0.19
TRACP01848 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRACP01848 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRACP01848 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRACP01848 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRACP01848 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRACP01848 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRACP01848 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRACP01848 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.21■□□□□ 0.18
TRACP01848 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRACP01848 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRACP01848 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.2■□□□□ 0.18
TRACP01848 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRACP01848 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRACP01848 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRACP01848 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRACP01848 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRACP01848 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRACP01848 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRACP01848 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
TRACP01848 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRACP01848 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRACP01848 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
TRACP01848 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRACP01848 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRACP01848 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRACP01848 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRACP01848 AC133561.1-201ENST00000568600 2415 ntBASIC16.18■□□□□ 0.18
TRACP01848 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRACP01848 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRACP01848 INO80B-203ENST00000409917 796 ntTSL 2 BASIC16.17■□□□□ 0.18
TRACP01848 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRACP01848 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRACP01848 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRACP01848 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.16■□□□□ 0.18
TRACP01848 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRACP01848 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRACP01848 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRACP01848 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRACP01848 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRACP01848 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRACP01848 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRACP01848 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRACP01848 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRACP01848 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRACP01848 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.15■□□□□ 0.18
TRACP01848 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.15■□□□□ 0.18
TRACP01848 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRACP01848 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRACP01848 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.14■□□□□ 0.17
TRACP01848 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRACP01848 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRACP01848 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRACP01848 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC16.14■□□□□ 0.17
TRACP01848 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.14■□□□□ 0.17
TRACP01848 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRACP01848 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRACP01848 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRACP01848 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRACP01848 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRACP01848 AC092803.2-201ENST00000564287 1899 ntBASIC16.13■□□□□ 0.17
TRACP01848 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.13■□□□□ 0.17
TRACP01848 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRACP01848 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRACP01848 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRACP01848 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.12■□□□□ 0.17
TRACP01848 ERN1-208ENST00000606895 2068 ntBASIC16.12■□□□□ 0.17
TRACP01848 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRACP01848 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRACP01848 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRACP01848 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRACP01848 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRACP01848 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRACP01848 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms