Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.77■□□□□ 0.59
LTAP01374 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LTAP01374 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTAP01374 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LTAP01374 RARRES2P7-201ENST00000567349 469 ntBASIC18.76■□□□□ 0.59
LTAP01374 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTAP01374 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LTAP01374 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTAP01374 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LTAP01374 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LTAP01374 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LTAP01374 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.75■□□□□ 0.59
LTAP01374 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTAP01374 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LTAP01374 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTAP01374 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LTAP01374 AL391121.1-201ENST00000607967 1349 ntBASIC18.74■□□□□ 0.59
LTAP01374 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTAP01374 AP004609.3-201ENST00000610705 1884 ntBASIC18.74■□□□□ 0.59
LTAP01374 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTAP01374 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTAP01374 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.73■□□□□ 0.59
LTAP01374 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.73■□□□□ 0.59
LTAP01374 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTAP01374 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTAP01374 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTAP01374 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTAP01374 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTAP01374 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LTAP01374 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTAP01374 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LTAP01374 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LTAP01374 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LTAP01374 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTAP01374 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.71■□□□□ 0.59
LTAP01374 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.71■□□□□ 0.59
LTAP01374 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTAP01374 WHAMMP2-203ENST00000563942 1603 ntBASIC18.71■□□□□ 0.58
LTAP01374 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LTAP01374 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LTAP01374 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LTAP01374 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LTAP01374 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LTAP01374 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTAP01374 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTAP01374 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LTAP01374 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LTAP01374 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTAP01374 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.68■□□□□ 0.58
LTAP01374 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.68■□□□□ 0.58
LTAP01374 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.68■□□□□ 0.58
LTAP01374 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LTAP01374 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTAP01374 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTAP01374 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.68■□□□□ 0.58
LTAP01374 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTAP01374 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTAP01374 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTAP01374 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.67■□□□□ 0.58
LTAP01374 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.67■□□□□ 0.58
LTAP01374 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTAP01374 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTAP01374 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTAP01374 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTAP01374 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTAP01374 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.65■□□□□ 0.58
LTAP01374 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LTAP01374 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.64■□□□□ 0.57
LTAP01374 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LTAP01374 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTAP01374 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.64■□□□□ 0.57
LTAP01374 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTAP01374 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LTAP01374 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTAP01374 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTAP01374 CAHM-201ENST00000604200 896 ntBASIC18.63■□□□□ 0.57
LTAP01374 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTAP01374 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.63■□□□□ 0.57
LTAP01374 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTAP01374 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTAP01374 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.63■□□□□ 0.57
LTAP01374 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTAP01374 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LTAP01374 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LTAP01374 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTAP01374 ERN1-208ENST00000606895 2068 ntBASIC18.61■□□□□ 0.57
LTAP01374 AC142472.1-201ENST00000612013 1741 ntBASIC18.61■□□□□ 0.57
LTAP01374 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LTAP01374 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
LTAP01374 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LTAP01374 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LTAP01374 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LTAP01374 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTAP01374 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.6■□□□□ 0.57
LTAP01374 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LTAP01374 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTAP01374 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTAP01374 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTAP01374 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
LTAP01374 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms