Protein–RNA interactions for Protein: O95405

ZFYVE9, Zinc finger FYVE domain-containing protein 9, humanhuman

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE9O95405 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
ZFYVE9O95405 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
ZFYVE9O95405 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
ZFYVE9O95405 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC36.23■■■■□ 3.39
ZFYVE9O95405 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
ZFYVE9O95405 SMPD5-203ENST00000639008 1464 ntBASIC36.23■■■■□ 3.39
ZFYVE9O95405 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
ZFYVE9O95405 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC36.22■■■■□ 3.39
ZFYVE9O95405 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC36.22■■■■□ 3.39
ZFYVE9O95405 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ZFYVE9O95405 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC36.21■■■■□ 3.39
ZFYVE9O95405 RAP2CP1-202ENST00000605179 643 ntBASIC36.21■■■■□ 3.39
ZFYVE9O95405 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ZFYVE9O95405 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
ZFYVE9O95405 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
ZFYVE9O95405 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC36.2■■■■□ 3.39
ZFYVE9O95405 SPCS2P3-201ENST00000500401 656 ntBASIC36.2■■■■□ 3.39
ZFYVE9O95405 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC36.2■■■■□ 3.38
ZFYVE9O95405 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
ZFYVE9O95405 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC36.19■■■■□ 3.38
ZFYVE9O95405 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC36.19■■■■□ 3.38
ZFYVE9O95405 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC36.18■■■■□ 3.38
ZFYVE9O95405 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
ZFYVE9O95405 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC36.17■■■■□ 3.38
ZFYVE9O95405 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC36.17■■■■□ 3.38
ZFYVE9O95405 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC36.17■■■■□ 3.38
ZFYVE9O95405 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC36.17■■■■□ 3.38
ZFYVE9O95405 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
ZFYVE9O95405 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC36.16■■■■□ 3.38
ZFYVE9O95405 AL359258.2-201ENST00000564063 1566 ntBASIC36.15■■■■□ 3.38
ZFYVE9O95405 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC36.14■■■■□ 3.38
ZFYVE9O95405 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
ZFYVE9O95405 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC36.14■■■■□ 3.38
ZFYVE9O95405 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC36.14■■■■□ 3.38
ZFYVE9O95405 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
ZFYVE9O95405 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
ZFYVE9O95405 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
ZFYVE9O95405 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC36.13■■■■□ 3.37
ZFYVE9O95405 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC36.13■■■■□ 3.37
ZFYVE9O95405 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
ZFYVE9O95405 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
ZFYVE9O95405 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
ZFYVE9O95405 AC100797.4-201ENST00000631653 1827 ntBASIC36.12■■■■□ 3.37
ZFYVE9O95405 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC36.12■■■■□ 3.37
ZFYVE9O95405 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
ZFYVE9O95405 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
ZFYVE9O95405 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC36.11■■■■□ 3.37
ZFYVE9O95405 AC093536.1-201ENST00000569153 554 ntBASIC36.11■■■■□ 3.37
ZFYVE9O95405 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC36.1■■■■□ 3.37
ZFYVE9O95405 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC36.1■■■■□ 3.37
ZFYVE9O95405 RP9P-202ENST00000450133 1212 ntBASIC36.09■■■■□ 3.37
ZFYVE9O95405 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
ZFYVE9O95405 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC36.08■■■■□ 3.37
ZFYVE9O95405 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC36.07■■■■□ 3.37
ZFYVE9O95405 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC36.07■■■■□ 3.36
ZFYVE9O95405 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
ZFYVE9O95405 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC36.06■■■■□ 3.36
ZFYVE9O95405 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC36.06■■■■□ 3.36
ZFYVE9O95405 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC36.06■■■■□ 3.36
ZFYVE9O95405 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC36.06■■■■□ 3.36
ZFYVE9O95405 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC36.06■■■■□ 3.36
ZFYVE9O95405 AC010980.1-201ENST00000587192 1142 ntBASIC36.06■■■■□ 3.36
ZFYVE9O95405 BEX3-202ENST00000372634 753 ntTSL 2 BASIC36.05■■■■□ 3.36
ZFYVE9O95405 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC36.05■■■■□ 3.36
ZFYVE9O95405 AC009299.2-201ENST00000482477 511 ntBASIC36.05■■■■□ 3.36
ZFYVE9O95405 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC36.05■■■■□ 3.36
ZFYVE9O95405 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
ZFYVE9O95405 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC36.05■■■■□ 3.36
ZFYVE9O95405 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
ZFYVE9O95405 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC36.04■■■■□ 3.36
ZFYVE9O95405 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC36.04■■■■□ 3.36
ZFYVE9O95405 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC36.03■■■■□ 3.36
ZFYVE9O95405 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC36.03■■■■□ 3.36
ZFYVE9O95405 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC36.03■■■■□ 3.36
ZFYVE9O95405 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
ZFYVE9O95405 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC36.02■■■■□ 3.36
ZFYVE9O95405 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
ZFYVE9O95405 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC36.01■■■■□ 3.36
ZFYVE9O95405 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC36.01■■■■□ 3.36
ZFYVE9O95405 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC36.01■■■■□ 3.36
ZFYVE9O95405 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC36.01■■■■□ 3.36
ZFYVE9O95405 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
ZFYVE9O95405 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC36.01■■■■□ 3.35
ZFYVE9O95405 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
ZFYVE9O95405 AL592295.1-201ENST00000400984 884 ntBASIC36■■■■□ 3.35
ZFYVE9O95405 AC103834.1-201ENST00000520383 144 ntBASIC36■■■■□ 3.35
ZFYVE9O95405 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
ZFYVE9O95405 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC36■■■■□ 3.35
ZFYVE9O95405 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC35.99■■■■□ 3.35
ZFYVE9O95405 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
ZFYVE9O95405 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
ZFYVE9O95405 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC35.99■■■■□ 3.35
ZFYVE9O95405 PVT1_1.1-201ENST00000615125 194 ntBASIC35.98■■■■□ 3.35
ZFYVE9O95405 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
ZFYVE9O95405 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
ZFYVE9O95405 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC35.97■■■■□ 3.35
ZFYVE9O95405 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
ZFYVE9O95405 KRT8P33-201ENST00000508125 1423 ntBASIC35.95■■■■□ 3.35
ZFYVE9O95405 AC074183.2-201ENST00000623112 922 ntBASIC35.95■■■■□ 3.35
ZFYVE9O95405 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms