Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Becn1O88597 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.83■■□□□ 1.73
Becn1O88597 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
Becn1O88597 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
Becn1O88597 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Becn1O88597 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Becn1O88597 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Becn1O88597 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Becn1O88597 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Becn1O88597 Gm24970-201ENSMUST00000175582 82 ntBASIC25.81■■□□□ 1.72
Becn1O88597 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.81■■□□□ 1.72
Becn1O88597 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Becn1O88597 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Becn1O88597 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Becn1O88597 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Becn1O88597 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
Becn1O88597 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Becn1O88597 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Becn1O88597 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Becn1O88597 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Becn1O88597 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Becn1O88597 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Becn1O88597 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
Becn1O88597 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
Becn1O88597 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Becn1O88597 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Becn1O88597 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Becn1O88597 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Becn1O88597 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.77■■□□□ 1.72
Becn1O88597 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Becn1O88597 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Becn1O88597 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Becn1O88597 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.72
Becn1O88597 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.76■■□□□ 1.71
Becn1O88597 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.76■■□□□ 1.71
Becn1O88597 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.76■■□□□ 1.71
Becn1O88597 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Becn1O88597 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Becn1O88597 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Becn1O88597 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.75■■□□□ 1.71
Becn1O88597 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Becn1O88597 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Becn1O88597 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Becn1O88597 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Becn1O88597 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Becn1O88597 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Becn1O88597 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Becn1O88597 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.72■■□□□ 1.71
Becn1O88597 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Becn1O88597 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.72■■□□□ 1.71
Becn1O88597 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Becn1O88597 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Becn1O88597 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Becn1O88597 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Becn1O88597 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Becn1O88597 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Becn1O88597 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Becn1O88597 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Becn1O88597 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Becn1O88597 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Becn1O88597 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Becn1O88597 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Becn1O88597 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Becn1O88597 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Becn1O88597 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Becn1O88597 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.69■■□□□ 1.7
Becn1O88597 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Becn1O88597 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Becn1O88597 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.68■■□□□ 1.7
Becn1O88597 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Becn1O88597 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Becn1O88597 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.67■■□□□ 1.7
Becn1O88597 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Becn1O88597 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Becn1O88597 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
Becn1O88597 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Becn1O88597 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Becn1O88597 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Becn1O88597 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Becn1O88597 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.63■■□□□ 1.69
Becn1O88597 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Becn1O88597 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Becn1O88597 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.62■■□□□ 1.69
Becn1O88597 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Becn1O88597 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Becn1O88597 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Becn1O88597 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Becn1O88597 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Becn1O88597 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Becn1O88597 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Becn1O88597 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.61■■□□□ 1.69
Becn1O88597 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Becn1O88597 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Becn1O88597 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms