Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.42■□□□□ 0.7
Cldn1O88551 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn1O88551 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.42■□□□□ 0.7
Cldn1O88551 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.42■□□□□ 0.7
Cldn1O88551 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cldn1O88551 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn1O88551 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
Cldn1O88551 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn1O88551 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn1O88551 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cldn1O88551 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Cldn1O88551 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.41■□□□□ 0.7
Cldn1O88551 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn1O88551 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.4■□□□□ 0.7
Cldn1O88551 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn1O88551 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn1O88551 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn1O88551 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn1O88551 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn1O88551 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldn1O88551 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn1O88551 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn1O88551 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cldn1O88551 Rps24-207ENSMUST00000224568 714 ntBASIC19.36■□□□□ 0.69
Cldn1O88551 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn1O88551 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn1O88551 Amer2-203ENSMUST00000225247 2662 ntBASIC19.35■□□□□ 0.69
Cldn1O88551 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn1O88551 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn1O88551 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn1O88551 Gm15820-201ENSMUST00000201566 728 ntBASIC19.35■□□□□ 0.69
Cldn1O88551 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cldn1O88551 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn1O88551 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn1O88551 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn1O88551 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn1O88551 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn1O88551 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.34■□□□□ 0.69
Cldn1O88551 Terc-201ENSMUST00000082862 423 ntBASIC19.34■□□□□ 0.69
Cldn1O88551 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn1O88551 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn1O88551 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn1O88551 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn1O88551 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn1O88551 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.33■□□□□ 0.68
Cldn1O88551 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cldn1O88551 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.32■□□□□ 0.68
Cldn1O88551 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn1O88551 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn1O88551 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.31■□□□□ 0.68
Cldn1O88551 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cldn1O88551 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn1O88551 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn1O88551 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn1O88551 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn1O88551 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn1O88551 Gm13238-201ENSMUST00000117655 780 ntBASIC19.3■□□□□ 0.68
Cldn1O88551 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn1O88551 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn1O88551 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn1O88551 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.3■□□□□ 0.68
Cldn1O88551 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn1O88551 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn1O88551 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cldn1O88551 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cldn1O88551 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Cldn1O88551 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn1O88551 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn1O88551 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cldn1O88551 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn1O88551 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Cldn1O88551 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn1O88551 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Cldn1O88551 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn1O88551 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cldn1O88551 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn1O88551 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn1O88551 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.26■□□□□ 0.67
Cldn1O88551 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.26■□□□□ 0.67
Cldn1O88551 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn1O88551 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn1O88551 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn1O88551 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn1O88551 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.25■□□□□ 0.67
Cldn1O88551 Gm14117-201ENSMUST00000122417 843 ntBASIC19.25■□□□□ 0.67
Cldn1O88551 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
Cldn1O88551 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn1O88551 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn1O88551 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn1O88551 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn1O88551 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn1O88551 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn1O88551 Gm45102-201ENSMUST00000207427 857 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms