Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops4O88544 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops4O88544 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cops4O88544 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cops4O88544 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.91■□□□□ 0.94
Cops4O88544 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cops4O88544 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.91■□□□□ 0.94
Cops4O88544 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cops4O88544 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Cops4O88544 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cops4O88544 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops4O88544 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops4O88544 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cops4O88544 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops4O88544 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cops4O88544 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cops4O88544 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cops4O88544 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.89■□□□□ 0.93
Cops4O88544 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cops4O88544 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops4O88544 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops4O88544 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops4O88544 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cops4O88544 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops4O88544 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops4O88544 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cops4O88544 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops4O88544 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.87■□□□□ 0.93
Cops4O88544 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cops4O88544 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cops4O88544 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cops4O88544 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops4O88544 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops4O88544 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cops4O88544 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cops4O88544 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cops4O88544 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cops4O88544 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Cops4O88544 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Cops4O88544 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cops4O88544 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cops4O88544 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cops4O88544 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cops4O88544 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cops4O88544 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cops4O88544 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cops4O88544 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cops4O88544 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cops4O88544 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops4O88544 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops4O88544 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cops4O88544 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops4O88544 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops4O88544 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.8■□□□□ 0.92
Cops4O88544 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cops4O88544 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cops4O88544 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cops4O88544 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cops4O88544 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cops4O88544 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cops4O88544 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops4O88544 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops4O88544 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops4O88544 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cops4O88544 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cops4O88544 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cops4O88544 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cops4O88544 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cops4O88544 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Cops4O88544 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cops4O88544 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cops4O88544 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cops4O88544 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops4O88544 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cops4O88544 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cops4O88544 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cops4O88544 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops4O88544 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cops4O88544 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops4O88544 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cops4O88544 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cops4O88544 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cops4O88544 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cops4O88544 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cops4O88544 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops4O88544 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops4O88544 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cops4O88544 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cops4O88544 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.73■□□□□ 0.91
Cops4O88544 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Cops4O88544 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cops4O88544 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.72■□□□□ 0.91
Cops4O88544 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cops4O88544 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms