Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
SNRNP200O75643 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SNRNP200O75643 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNRNP200O75643 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNRNP200O75643 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SNRNP200O75643 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SNRNP200O75643 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SNRNP200O75643 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SNRNP200O75643 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SNRNP200O75643 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
SNRNP200O75643 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.1■■□□□ 1.45
SNRNP200O75643 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
SNRNP200O75643 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
SNRNP200O75643 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.09■■□□□ 1.45
SNRNP200O75643 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
SNRNP200O75643 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
SNRNP200O75643 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.08■■□□□ 1.45
SNRNP200O75643 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SNRNP200O75643 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.08■■□□□ 1.44
SNRNP200O75643 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
SNRNP200O75643 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
SNRNP200O75643 GPX1-201ENST00000419349 1106 ntBASIC24.07■■□□□ 1.44
SNRNP200O75643 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.07■■□□□ 1.44
SNRNP200O75643 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SNRNP200O75643 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.07■■□□□ 1.44
SNRNP200O75643 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.07■■□□□ 1.44
SNRNP200O75643 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SNRNP200O75643 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SNRNP200O75643 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SNRNP200O75643 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.06■■□□□ 1.44
SNRNP200O75643 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNRNP200O75643 AC092296.2-201ENST00000589470 999 ntBASIC24.06■■□□□ 1.44
SNRNP200O75643 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNRNP200O75643 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNRNP200O75643 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.05■■□□□ 1.44
SNRNP200O75643 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.05■■□□□ 1.44
SNRNP200O75643 AL157400.5-201ENST00000507624 621 ntBASIC24.04■■□□□ 1.44
SNRNP200O75643 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
SNRNP200O75643 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNRNP200O75643 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNRNP200O75643 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SNRNP200O75643 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SNRNP200O75643 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.04■■□□□ 1.44
SNRNP200O75643 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SNRNP200O75643 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNRNP200O75643 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SNRNP200O75643 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SNRNP200O75643 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.03■■□□□ 1.44
SNRNP200O75643 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNRNP200O75643 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SNRNP200O75643 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.02■■□□□ 1.44
SNRNP200O75643 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.02■■□□□ 1.44
SNRNP200O75643 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.02■■□□□ 1.44
SNRNP200O75643 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SNRNP200O75643 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.02■■□□□ 1.44
SNRNP200O75643 WHAMMP3-201ENST00000611636 1609 ntBASIC24.01■■□□□ 1.43
SNRNP200O75643 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNRNP200O75643 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNRNP200O75643 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24■■□□□ 1.43
SNRNP200O75643 BX255925.1-201ENST00000566954 1854 ntBASIC24■■□□□ 1.43
SNRNP200O75643 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24■■□□□ 1.43
SNRNP200O75643 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24■■□□□ 1.43
SNRNP200O75643 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.99■■□□□ 1.43
SNRNP200O75643 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.99■■□□□ 1.43
SNRNP200O75643 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNRNP200O75643 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.98■■□□□ 1.43
SNRNP200O75643 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNRNP200O75643 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNRNP200O75643 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SNRNP200O75643 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNRNP200O75643 AC142086.6-201ENST00000621154 1765 ntBASIC23.98■■□□□ 1.43
SNRNP200O75643 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SNRNP200O75643 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SNRNP200O75643 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
SNRNP200O75643 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
SNRNP200O75643 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SNRNP200O75643 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
SNRNP200O75643 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SNRNP200O75643 AC022413.1-201ENST00000624602 984 ntBASIC23.94■■□□□ 1.42
SNRNP200O75643 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.94■■□□□ 1.42
SNRNP200O75643 RARRES2P2-201ENST00000394842 485 ntBASIC23.93■■□□□ 1.42
SNRNP200O75643 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
SNRNP200O75643 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SNRNP200O75643 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNRNP200O75643 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SNRNP200O75643 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNRNP200O75643 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNRNP200O75643 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SNRNP200O75643 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SNRNP200O75643 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SNRNP200O75643 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNRNP200O75643 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNRNP200O75643 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNRNP200O75643 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNRNP200O75643 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNRNP200O75643 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.9■■□□□ 1.42
SNRNP200O75643 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.9■■□□□ 1.42
SNRNP200O75643 AL449106.1-201ENST00000608517 1980 ntBASIC23.9■■□□□ 1.42
SNRNP200O75643 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNRNP200O75643 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms