Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 AC092803.2-201ENST00000564287 1899 ntBASIC18.56■□□□□ 0.56
SH2D1AO60880 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.56■□□□□ 0.56
SH2D1AO60880 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SH2D1AO60880 DUSP8P4-201ENST00000399538 1761 ntBASIC18.55■□□□□ 0.56
SH2D1AO60880 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH2D1AO60880 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SH2D1AO60880 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SH2D1AO60880 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.55■□□□□ 0.56
SH2D1AO60880 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
SH2D1AO60880 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D1AO60880 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D1AO60880 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SH2D1AO60880 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D1AO60880 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D1AO60880 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D1AO60880 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.53■□□□□ 0.56
SH2D1AO60880 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D1AO60880 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D1AO60880 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.52■□□□□ 0.56
SH2D1AO60880 MIR762-201ENST00000390236 83 ntBASIC18.52■□□□□ 0.56
SH2D1AO60880 AC136428.2-201ENST00000563187 214 ntBASIC18.52■□□□□ 0.56
SH2D1AO60880 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.52■□□□□ 0.56
SH2D1AO60880 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D1AO60880 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH2D1AO60880 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH2D1AO60880 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D1AO60880 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D1AO60880 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D1AO60880 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.51■□□□□ 0.55
SH2D1AO60880 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SH2D1AO60880 AP004609.3-201ENST00000610705 1884 ntBASIC18.51■□□□□ 0.55
SH2D1AO60880 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SH2D1AO60880 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D1AO60880 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH2D1AO60880 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.5■□□□□ 0.55
SH2D1AO60880 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH2D1AO60880 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SH2D1AO60880 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.5■□□□□ 0.55
SH2D1AO60880 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH2D1AO60880 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SH2D1AO60880 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH2D1AO60880 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.49■□□□□ 0.55
SH2D1AO60880 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SH2D1AO60880 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SH2D1AO60880 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SH2D1AO60880 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SH2D1AO60880 AC097358.2-201ENST00000607541 1159 ntBASIC18.49■□□□□ 0.55
SH2D1AO60880 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D1AO60880 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D1AO60880 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.48■□□□□ 0.55
SH2D1AO60880 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D1AO60880 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.48■□□□□ 0.55
SH2D1AO60880 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SH2D1AO60880 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D1AO60880 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH2D1AO60880 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D1AO60880 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D1AO60880 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D1AO60880 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.47■□□□□ 0.55
SH2D1AO60880 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D1AO60880 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SH2D1AO60880 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SH2D1AO60880 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D1AO60880 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.46■□□□□ 0.55
SH2D1AO60880 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D1AO60880 LINC00273-201ENST00000539813 1452 ntBASIC18.46■□□□□ 0.54
SH2D1AO60880 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D1AO60880 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SH2D1AO60880 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.45■□□□□ 0.54
SH2D1AO60880 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SH2D1AO60880 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D1AO60880 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D1AO60880 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SH2D1AO60880 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D1AO60880 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D1AO60880 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D1AO60880 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SH2D1AO60880 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D1AO60880 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D1AO60880 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.43■□□□□ 0.54
SH2D1AO60880 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D1AO60880 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.43■□□□□ 0.54
SH2D1AO60880 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SH2D1AO60880 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D1AO60880 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D1AO60880 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D1AO60880 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D1AO60880 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D1AO60880 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SH2D1AO60880 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D1AO60880 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D1AO60880 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D1AO60880 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.41■□□□□ 0.54
SH2D1AO60880 AC093323.1-202ENST00000635031 2045 ntBASIC18.41■□□□□ 0.54
SH2D1AO60880 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.41■□□□□ 0.54
SH2D1AO60880 AC108673.1-201ENST00000510422 1159 ntBASIC18.41■□□□□ 0.54
SH2D1AO60880 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SH2D1AO60880 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SH2D1AO60880 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.41■□□□□ 0.54
SH2D1AO60880 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms