Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SncaO55042 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SncaO55042 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SncaO55042 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SncaO55042 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SncaO55042 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SncaO55042 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SncaO55042 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.66■□□□□ 0.58
SncaO55042 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SncaO55042 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SncaO55042 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SncaO55042 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SncaO55042 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SncaO55042 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SncaO55042 Nkain2-201ENSMUST00000092602 558 ntBASIC18.65■□□□□ 0.58
SncaO55042 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SncaO55042 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SncaO55042 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SncaO55042 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SncaO55042 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SncaO55042 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SncaO55042 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.64■□□□□ 0.57
SncaO55042 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SncaO55042 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SncaO55042 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SncaO55042 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SncaO55042 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SncaO55042 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SncaO55042 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SncaO55042 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SncaO55042 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SncaO55042 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SncaO55042 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.61■□□□□ 0.57
SncaO55042 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.61■□□□□ 0.57
SncaO55042 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SncaO55042 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.6■□□□□ 0.57
SncaO55042 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SncaO55042 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SncaO55042 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.6■□□□□ 0.57
SncaO55042 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SncaO55042 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SncaO55042 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SncaO55042 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SncaO55042 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SncaO55042 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SncaO55042 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.59■□□□□ 0.57
SncaO55042 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SncaO55042 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SncaO55042 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SncaO55042 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
SncaO55042 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SncaO55042 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.58■□□□□ 0.56
SncaO55042 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SncaO55042 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SncaO55042 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SncaO55042 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SncaO55042 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.57■□□□□ 0.56
SncaO55042 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.57■□□□□ 0.56
SncaO55042 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SncaO55042 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SncaO55042 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SncaO55042 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SncaO55042 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SncaO55042 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SncaO55042 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SncaO55042 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SncaO55042 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SncaO55042 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.55■□□□□ 0.56
SncaO55042 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SncaO55042 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SncaO55042 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SncaO55042 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SncaO55042 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.54■□□□□ 0.56
SncaO55042 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SncaO55042 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
SncaO55042 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SncaO55042 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SncaO55042 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SncaO55042 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SncaO55042 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SncaO55042 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SncaO55042 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SncaO55042 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SncaO55042 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SncaO55042 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SncaO55042 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SncaO55042 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SncaO55042 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.52■□□□□ 0.56
SncaO55042 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.52■□□□□ 0.56
SncaO55042 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SncaO55042 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.52■□□□□ 0.56
SncaO55042 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SncaO55042 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SncaO55042 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms