Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.81■■□□□ 1.4
Cldn5O54942 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cldn5O54942 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cldn5O54942 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cldn5O54942 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.8■■□□□ 1.4
Cldn5O54942 Gm12366-201ENSMUST00000121722 873 ntBASIC23.8■■□□□ 1.4
Cldn5O54942 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.8■■□□□ 1.4
Cldn5O54942 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.8■■□□□ 1.4
Cldn5O54942 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.8■■□□□ 1.4
Cldn5O54942 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cldn5O54942 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Cldn5O54942 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cldn5O54942 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.8■■□□□ 1.4
Cldn5O54942 Gm5786-201ENSMUST00000085368 882 ntBASIC23.8■■□□□ 1.4
Cldn5O54942 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.8■■□□□ 1.4
Cldn5O54942 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cldn5O54942 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cldn5O54942 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cldn5O54942 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cldn5O54942 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cldn5O54942 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.77■■□□□ 1.4
Cldn5O54942 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cldn5O54942 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cldn5O54942 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cldn5O54942 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cldn5O54942 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cldn5O54942 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.75■■□□□ 1.39
Cldn5O54942 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.75■■□□□ 1.39
Cldn5O54942 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cldn5O54942 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Cldn5O54942 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cldn5O54942 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cldn5O54942 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Cldn5O54942 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cldn5O54942 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cldn5O54942 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cldn5O54942 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Cldn5O54942 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.73■■□□□ 1.39
Cldn5O54942 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.73■■□□□ 1.39
Cldn5O54942 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cldn5O54942 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.72■■□□□ 1.39
Cldn5O54942 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cldn5O54942 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cldn5O54942 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.71■■□□□ 1.39
Cldn5O54942 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cldn5O54942 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Cldn5O54942 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cldn5O54942 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cldn5O54942 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cldn5O54942 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cldn5O54942 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cldn5O54942 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Cldn5O54942 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cldn5O54942 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cldn5O54942 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Cldn5O54942 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.67■■□□□ 1.38
Cldn5O54942 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cldn5O54942 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cldn5O54942 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cldn5O54942 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cldn5O54942 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Cldn5O54942 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cldn5O54942 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cldn5O54942 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cldn5O54942 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cldn5O54942 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.64■■□□□ 1.38
Cldn5O54942 Gm14523-201ENSMUST00000117260 558 ntBASIC23.64■■□□□ 1.37
Cldn5O54942 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Cldn5O54942 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.64■■□□□ 1.37
Cldn5O54942 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.64■■□□□ 1.37
Cldn5O54942 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cldn5O54942 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.63■■□□□ 1.37
Cldn5O54942 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cldn5O54942 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.63■■□□□ 1.37
Cldn5O54942 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cldn5O54942 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Cldn5O54942 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Cldn5O54942 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Cldn5O54942 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.62■■□□□ 1.37
Cldn5O54942 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cldn5O54942 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Cldn5O54942 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cldn5O54942 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Cldn5O54942 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cldn5O54942 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Cldn5O54942 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.6■■□□□ 1.37
Cldn5O54942 Gm7332-201ENSMUST00000118351 454 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms