Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.48■■■□□ 2.79
KCNQ3O43525 AC126177.7-201ENST00000547904 679 ntBASIC32.48■■■□□ 2.79
KCNQ3O43525 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
KCNQ3O43525 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
KCNQ3O43525 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
KCNQ3O43525 AL033527.3-201ENST00000566366 1196 ntBASIC32.46■■■□□ 2.79
KCNQ3O43525 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNQ3O43525 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNQ3O43525 AC139426.1-201ENST00000568218 2529 ntBASIC32.46■■■□□ 2.79
KCNQ3O43525 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
KCNQ3O43525 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
KCNQ3O43525 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
KCNQ3O43525 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
KCNQ3O43525 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.45■■■□□ 2.78
KCNQ3O43525 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.44■■■□□ 2.78
KCNQ3O43525 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
KCNQ3O43525 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KCNQ3O43525 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
KCNQ3O43525 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.43■■■□□ 2.78
KCNQ3O43525 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
KCNQ3O43525 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
KCNQ3O43525 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
KCNQ3O43525 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.43■■■□□ 2.78
KCNQ3O43525 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
KCNQ3O43525 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
KCNQ3O43525 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
KCNQ3O43525 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.42■■■□□ 2.78
KCNQ3O43525 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
KCNQ3O43525 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KCNQ3O43525 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
KCNQ3O43525 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
KCNQ3O43525 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
KCNQ3O43525 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KCNQ3O43525 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNQ3O43525 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KCNQ3O43525 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
KCNQ3O43525 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.39■■■□□ 2.78
KCNQ3O43525 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.39■■■□□ 2.78
KCNQ3O43525 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
KCNQ3O43525 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
KCNQ3O43525 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
KCNQ3O43525 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.38■■■□□ 2.77
KCNQ3O43525 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
KCNQ3O43525 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
KCNQ3O43525 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNQ3O43525 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNQ3O43525 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
KCNQ3O43525 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
KCNQ3O43525 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
KCNQ3O43525 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
KCNQ3O43525 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
KCNQ3O43525 AC004987.1-201ENST00000428627 508 ntBASIC32.36■■■□□ 2.77
KCNQ3O43525 AC007029.1-201ENST00000604183 313 ntBASIC32.36■■■□□ 2.77
KCNQ3O43525 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
KCNQ3O43525 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.35■■■□□ 2.77
KCNQ3O43525 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.35■■■□□ 2.77
KCNQ3O43525 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
KCNQ3O43525 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
KCNQ3O43525 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC32.33■■■□□ 2.77
KCNQ3O43525 SMPD5-203ENST00000639008 1464 ntBASIC32.32■■■□□ 2.76
KCNQ3O43525 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.32■■■□□ 2.76
KCNQ3O43525 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
KCNQ3O43525 AC009831.1-201ENST00000580420 1582 ntBASIC32.32■■■□□ 2.76
KCNQ3O43525 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.32■■■□□ 2.76
KCNQ3O43525 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
KCNQ3O43525 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
KCNQ3O43525 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
KCNQ3O43525 AC025884.2-201ENST00000553429 711 ntBASIC32.3■■■□□ 2.76
KCNQ3O43525 ATP5G2P3-201ENST00000429083 425 ntBASIC32.29■■■□□ 2.76
KCNQ3O43525 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
KCNQ3O43525 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
KCNQ3O43525 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
KCNQ3O43525 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
KCNQ3O43525 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
KCNQ3O43525 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.27■■■□□ 2.76
KCNQ3O43525 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.27■■■□□ 2.76
KCNQ3O43525 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
KCNQ3O43525 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
KCNQ3O43525 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.26■■■□□ 2.76
KCNQ3O43525 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
KCNQ3O43525 AL592293.1-201ENST00000502889 1188 ntBASIC32.26■■■□□ 2.75
KCNQ3O43525 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.26■■■□□ 2.75
KCNQ3O43525 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
KCNQ3O43525 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
KCNQ3O43525 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
KCNQ3O43525 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
KCNQ3O43525 TSPY13P-201ENST00000338964 914 ntBASIC32.25■■■□□ 2.75
KCNQ3O43525 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
KCNQ3O43525 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.24■■■□□ 2.75
KCNQ3O43525 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.24■■■□□ 2.75
KCNQ3O43525 AC133552.2-201ENST00000619106 1032 ntBASIC32.24■■■□□ 2.75
KCNQ3O43525 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.24■■■□□ 2.75
KCNQ3O43525 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
KCNQ3O43525 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
KCNQ3O43525 AC026202.3-201ENST00000600805 1127 ntBASIC32.23■■■□□ 2.75
KCNQ3O43525 AC129492.7-201ENST00000622992 756 ntBASIC32.23■■■□□ 2.75
KCNQ3O43525 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
KCNQ3O43525 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.23■■■□□ 2.75
KCNQ3O43525 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.22■■■□□ 2.75
KCNQ3O43525 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms