Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prrt1O35449 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prrt1O35449 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prrt1O35449 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prrt1O35449 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.23■□□□□ 0.67
Prrt1O35449 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrt1O35449 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prrt1O35449 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prrt1O35449 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.23■□□□□ 0.67
Prrt1O35449 Gm8109-201ENSMUST00000194076 746 ntBASIC19.23■□□□□ 0.67
Prrt1O35449 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prrt1O35449 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prrt1O35449 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Prrt1O35449 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Prrt1O35449 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prrt1O35449 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prrt1O35449 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.21■□□□□ 0.67
Prrt1O35449 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prrt1O35449 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prrt1O35449 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Prrt1O35449 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prrt1O35449 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Prrt1O35449 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prrt1O35449 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Prrt1O35449 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prrt1O35449 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
Prrt1O35449 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prrt1O35449 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prrt1O35449 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prrt1O35449 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prrt1O35449 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prrt1O35449 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prrt1O35449 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prrt1O35449 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prrt1O35449 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prrt1O35449 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prrt1O35449 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrt1O35449 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Prrt1O35449 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrt1O35449 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Prrt1O35449 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Prrt1O35449 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrt1O35449 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prrt1O35449 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prrt1O35449 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Prrt1O35449 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prrt1O35449 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Prrt1O35449 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prrt1O35449 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prrt1O35449 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prrt1O35449 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prrt1O35449 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Prrt1O35449 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prrt1O35449 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prrt1O35449 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prrt1O35449 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prrt1O35449 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Prrt1O35449 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prrt1O35449 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Prrt1O35449 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Prrt1O35449 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prrt1O35449 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prrt1O35449 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prrt1O35449 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prrt1O35449 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prrt1O35449 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prrt1O35449 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prrt1O35449 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prrt1O35449 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prrt1O35449 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prrt1O35449 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prrt1O35449 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prrt1O35449 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Prrt1O35449 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.09■□□□□ 0.65
Prrt1O35449 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prrt1O35449 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prrt1O35449 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prrt1O35449 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prrt1O35449 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Prrt1O35449 Gm24804-201ENSMUST00000174982 85 ntBASIC19.08■□□□□ 0.64
Prrt1O35449 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prrt1O35449 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prrt1O35449 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prrt1O35449 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prrt1O35449 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.07■□□□□ 0.64
Prrt1O35449 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prrt1O35449 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.07■□□□□ 0.64
Prrt1O35449 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms