Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPM1DO15297 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PPM1DO15297 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PPM1DO15297 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
PPM1DO15297 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PPM1DO15297 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PPM1DO15297 DRD5P2-201ENST00000421395 2012 ntBASIC24.4■■□□□ 1.5
PPM1DO15297 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.4■■□□□ 1.5
PPM1DO15297 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PPM1DO15297 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PPM1DO15297 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PPM1DO15297 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.39■■□□□ 1.49
PPM1DO15297 AC126177.7-201ENST00000547904 679 ntBASIC24.39■■□□□ 1.49
PPM1DO15297 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PPM1DO15297 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PPM1DO15297 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPM1DO15297 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.37■■□□□ 1.49
PPM1DO15297 NTF6A-201ENST00000591175 560 ntBASIC24.37■■□□□ 1.49
PPM1DO15297 AP002414.2-202ENST00000590929 1450 ntBASIC24.37■■□□□ 1.49
PPM1DO15297 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PPM1DO15297 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PPM1DO15297 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PPM1DO15297 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPM1DO15297 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPM1DO15297 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.35■■□□□ 1.49
PPM1DO15297 ECEL1P2-201ENST00000461596 1295 ntBASIC24.35■■□□□ 1.49
PPM1DO15297 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.35■■□□□ 1.49
PPM1DO15297 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PPM1DO15297 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1DO15297 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.34■■□□□ 1.49
PPM1DO15297 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1DO15297 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.34■■□□□ 1.49
PPM1DO15297 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1DO15297 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PPM1DO15297 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1DO15297 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPM1DO15297 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PPM1DO15297 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PPM1DO15297 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.32■■□□□ 1.48
PPM1DO15297 AL157400.5-201ENST00000507624 621 ntBASIC24.32■■□□□ 1.48
PPM1DO15297 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.32■■□□□ 1.48
PPM1DO15297 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.32■■□□□ 1.48
PPM1DO15297 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPM1DO15297 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PPM1DO15297 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPM1DO15297 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPM1DO15297 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.31■■□□□ 1.48
PPM1DO15297 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PPM1DO15297 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1DO15297 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1DO15297 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1DO15297 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1DO15297 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1DO15297 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.3■■□□□ 1.48
PPM1DO15297 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PPM1DO15297 U85056.1-201ENST00000616429 682 ntBASIC24.3■■□□□ 1.48
PPM1DO15297 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPM1DO15297 AL359258.2-201ENST00000564063 1566 ntBASIC24.29■■□□□ 1.48
PPM1DO15297 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPM1DO15297 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.29■■□□□ 1.48
PPM1DO15297 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PPM1DO15297 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PPM1DO15297 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PPM1DO15297 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PPM1DO15297 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.28■■□□□ 1.48
PPM1DO15297 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPM1DO15297 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPM1DO15297 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.27■■□□□ 1.48
PPM1DO15297 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.27■■□□□ 1.48
PPM1DO15297 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.27■■□□□ 1.48
PPM1DO15297 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1DO15297 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.26■■□□□ 1.47
PPM1DO15297 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
PPM1DO15297 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.26■■□□□ 1.47
PPM1DO15297 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1DO15297 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1DO15297 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPM1DO15297 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1DO15297 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1DO15297 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPM1DO15297 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.24■■□□□ 1.47
PPM1DO15297 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPM1DO15297 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PPM1DO15297 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPM1DO15297 AC012354.3-201ENST00000623734 483 ntBASIC24.23■■□□□ 1.47
PPM1DO15297 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PPM1DO15297 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.23■■□□□ 1.47
PPM1DO15297 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPM1DO15297 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPM1DO15297 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.22■■□□□ 1.47
PPM1DO15297 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PPM1DO15297 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
PPM1DO15297 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PPM1DO15297 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PPM1DO15297 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
PPM1DO15297 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.19■■□□□ 1.46
PPM1DO15297 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PPM1DO15297 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PPM1DO15297 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PPM1DO15297 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms