Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHL1O00533 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHL1O00533 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
CHL1O00533 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CHL1O00533 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CHL1O00533 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
CHL1O00533 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.52■■■□□ 2.8
CHL1O00533 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.52■■■□□ 2.8
CHL1O00533 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHL1O00533 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHL1O00533 RNF126P1-201ENST00000567452 1320 ntBASIC32.51■■■□□ 2.8
CHL1O00533 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CHL1O00533 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
CHL1O00533 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.51■■■□□ 2.79
CHL1O00533 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
CHL1O00533 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHL1O00533 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC32.5■■■□□ 2.79
CHL1O00533 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CHL1O00533 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
CHL1O00533 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.48■■■□□ 2.79
CHL1O00533 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CHL1O00533 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CHL1O00533 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
CHL1O00533 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CHL1O00533 AC092296.2-201ENST00000589470 999 ntBASIC32.47■■■□□ 2.79
CHL1O00533 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.46■■■□□ 2.79
CHL1O00533 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CHL1O00533 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CHL1O00533 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
CHL1O00533 RARRES2P2-201ENST00000394842 485 ntBASIC32.46■■■□□ 2.79
CHL1O00533 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.46■■■□□ 2.79
CHL1O00533 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
CHL1O00533 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHL1O00533 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.45■■■□□ 2.79
CHL1O00533 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.78
CHL1O00533 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CHL1O00533 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
CHL1O00533 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CHL1O00533 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CHL1O00533 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHL1O00533 AC126177.7-201ENST00000547904 679 ntBASIC32.41■■■□□ 2.78
CHL1O00533 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
CHL1O00533 AL359258.2-201ENST00000564063 1566 ntBASIC32.41■■■□□ 2.78
CHL1O00533 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CHL1O00533 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
CHL1O00533 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.4■■■□□ 2.78
CHL1O00533 AL157400.5-201ENST00000507624 621 ntBASIC32.4■■■□□ 2.78
CHL1O00533 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHL1O00533 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
CHL1O00533 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
CHL1O00533 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CHL1O00533 LINC01003-201ENST00000564834 1764 ntBASIC32.37■■■□□ 2.77
CHL1O00533 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.37■■■□□ 2.77
CHL1O00533 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHL1O00533 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.37■■■□□ 2.77
CHL1O00533 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
CHL1O00533 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CHL1O00533 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
CHL1O00533 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CHL1O00533 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CHL1O00533 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.33■■■□□ 2.77
CHL1O00533 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHL1O00533 ECEL1P2-201ENST00000461596 1295 ntBASIC32.33■■■□□ 2.77
CHL1O00533 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CHL1O00533 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CHL1O00533 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.32■■■□□ 2.76
CHL1O00533 AC142086.6-201ENST00000621154 1765 ntBASIC32.32■■■□□ 2.76
CHL1O00533 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHL1O00533 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.32■■■□□ 2.76
CHL1O00533 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.31■■■□□ 2.76
CHL1O00533 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CHL1O00533 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHL1O00533 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC32.3■■■□□ 2.76
CHL1O00533 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.3■■■□□ 2.76
CHL1O00533 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHL1O00533 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.29■■■□□ 2.76
CHL1O00533 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHL1O00533 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.28■■■□□ 2.76
CHL1O00533 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CHL1O00533 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.27■■■□□ 2.76
CHL1O00533 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
CHL1O00533 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CHL1O00533 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.27■■■□□ 2.76
CHL1O00533 WHAMMP3-201ENST00000611636 1609 ntBASIC32.26■■■□□ 2.76
CHL1O00533 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
CHL1O00533 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.26■■■□□ 2.75
CHL1O00533 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHL1O00533 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CHL1O00533 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHL1O00533 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHL1O00533 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHL1O00533 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
CHL1O00533 BX255925.1-201ENST00000566954 1854 ntBASIC32.25■■■□□ 2.75
CHL1O00533 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHL1O00533 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHL1O00533 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
CHL1O00533 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHL1O00533 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHL1O00533 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.23■■■□□ 2.75
CHL1O00533 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms