Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Dchs1E9PVD3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.61■□□□□ 0.89
Dchs1E9PVD3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.61■□□□□ 0.89
Dchs1E9PVD3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.61■□□□□ 0.89
Dchs1E9PVD3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dchs1E9PVD3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dchs1E9PVD3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Dchs1E9PVD3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dchs1E9PVD3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dchs1E9PVD3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.59■□□□□ 0.89
Dchs1E9PVD3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
Dchs1E9PVD3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Dchs1E9PVD3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Dchs1E9PVD3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dchs1E9PVD3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Dchs1E9PVD3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.58■□□□□ 0.88
Dchs1E9PVD3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Dchs1E9PVD3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.58■□□□□ 0.88
Dchs1E9PVD3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Dchs1E9PVD3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Dchs1E9PVD3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dchs1E9PVD3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dchs1E9PVD3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dchs1E9PVD3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dchs1E9PVD3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dchs1E9PVD3 Gm13238-201ENSMUST00000117655 780 ntBASIC20.56■□□□□ 0.88
Dchs1E9PVD3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dchs1E9PVD3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.56■□□□□ 0.88
Dchs1E9PVD3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Dchs1E9PVD3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dchs1E9PVD3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dchs1E9PVD3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dchs1E9PVD3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Dchs1E9PVD3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Dchs1E9PVD3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Dchs1E9PVD3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Dchs1E9PVD3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.54■□□□□ 0.88
Dchs1E9PVD3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dchs1E9PVD3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dchs1E9PVD3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Dchs1E9PVD3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Dchs1E9PVD3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Dchs1E9PVD3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Dchs1E9PVD3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Dchs1E9PVD3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.51■□□□□ 0.87
Dchs1E9PVD3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dchs1E9PVD3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dchs1E9PVD3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Dchs1E9PVD3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dchs1E9PVD3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dchs1E9PVD3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dchs1E9PVD3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dchs1E9PVD3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.49■□□□□ 0.87
Dchs1E9PVD3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.49■□□□□ 0.87
Dchs1E9PVD3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Dchs1E9PVD3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dchs1E9PVD3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dchs1E9PVD3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Dchs1E9PVD3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dchs1E9PVD3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dchs1E9PVD3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.48■□□□□ 0.87
Dchs1E9PVD3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dchs1E9PVD3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dchs1E9PVD3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dchs1E9PVD3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Dchs1E9PVD3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dchs1E9PVD3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dchs1E9PVD3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dchs1E9PVD3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Dchs1E9PVD3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dchs1E9PVD3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dchs1E9PVD3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dchs1E9PVD3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.45■□□□□ 0.86
Dchs1E9PVD3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.45■□□□□ 0.86
Dchs1E9PVD3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Dchs1E9PVD3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Dchs1E9PVD3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Dchs1E9PVD3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Dchs1E9PVD3 Gm43566-201ENSMUST00000196851 808 ntBASIC20.44■□□□□ 0.86
Dchs1E9PVD3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Dchs1E9PVD3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.44■□□□□ 0.86
Dchs1E9PVD3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Dchs1E9PVD3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Dchs1E9PVD3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Dchs1E9PVD3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Dchs1E9PVD3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dchs1E9PVD3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.42■□□□□ 0.86
Dchs1E9PVD3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Dchs1E9PVD3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Dchs1E9PVD3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dchs1E9PVD3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Dchs1E9PVD3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Dchs1E9PVD3 Gm9959-201ENSMUST00000068277 390 ntBASIC20.41■□□□□ 0.86
Dchs1E9PVD3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Dchs1E9PVD3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dchs1E9PVD3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.4■□□□□ 0.86
Dchs1E9PVD3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.4■□□□□ 0.86
Dchs1E9PVD3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Dchs1E9PVD3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.4■□□□□ 0.86
Dchs1E9PVD3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms