Protein–RNA interactions for Protein: D3Z6J4

Vpreb3, Pre-B lymphocyte gene 3, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vpreb3D3Z6J4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vpreb3D3Z6J4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vpreb3D3Z6J4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vpreb3D3Z6J4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vpreb3D3Z6J4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vpreb3D3Z6J4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vpreb3D3Z6J4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vpreb3D3Z6J4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Vpreb3D3Z6J4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vpreb3D3Z6J4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vpreb3D3Z6J4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vpreb3D3Z6J4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vpreb3D3Z6J4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vpreb3D3Z6J4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vpreb3D3Z6J4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vpreb3D3Z6J4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vpreb3D3Z6J4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vpreb3D3Z6J4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vpreb3D3Z6J4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.3□□□□□ -0.12
Vpreb3D3Z6J4 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.3□□□□□ -0.12
Vpreb3D3Z6J4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vpreb3D3Z6J4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vpreb3D3Z6J4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vpreb3D3Z6J4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vpreb3D3Z6J4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vpreb3D3Z6J4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vpreb3D3Z6J4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vpreb3D3Z6J4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vpreb3D3Z6J4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Vpreb3D3Z6J4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Vpreb3D3Z6J4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vpreb3D3Z6J4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.27□□□□□ -0.12
Vpreb3D3Z6J4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vpreb3D3Z6J4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vpreb3D3Z6J4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vpreb3D3Z6J4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vpreb3D3Z6J4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vpreb3D3Z6J4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Particl-201ENSMUST00000205370 1560 ntBASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.26□□□□□ -0.13
Vpreb3D3Z6J4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vpreb3D3Z6J4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vpreb3D3Z6J4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vpreb3D3Z6J4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vpreb3D3Z6J4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vpreb3D3Z6J4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vpreb3D3Z6J4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms