Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.57■■■□□ 2.48
Scn7aB1AYL1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Scn7aB1AYL1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Scn7aB1AYL1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Scn7aB1AYL1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Scn7aB1AYL1 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.52■■■□□ 2.48
Scn7aB1AYL1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Scn7aB1AYL1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Scn7aB1AYL1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Scn7aB1AYL1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Scn7aB1AYL1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
Scn7aB1AYL1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Scn7aB1AYL1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Scn7aB1AYL1 Gm5921-201ENSMUST00000075898 882 ntBASIC30.5■■■□□ 2.47
Scn7aB1AYL1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Scn7aB1AYL1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Scn7aB1AYL1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Scn7aB1AYL1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Scn7aB1AYL1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Scn7aB1AYL1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Scn7aB1AYL1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Scn7aB1AYL1 Gm44428-201ENSMUST00000204474 874 ntBASIC30.44■■■□□ 2.46
Scn7aB1AYL1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Scn7aB1AYL1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scn7aB1AYL1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30.42■■■□□ 2.46
Scn7aB1AYL1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Scn7aB1AYL1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Scn7aB1AYL1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Scn7aB1AYL1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Scn7aB1AYL1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Scn7aB1AYL1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
Scn7aB1AYL1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Scn7aB1AYL1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC30.39■■■□□ 2.45
Scn7aB1AYL1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
Scn7aB1AYL1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC30.38■■■□□ 2.45
Scn7aB1AYL1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
Scn7aB1AYL1 Gm5812-201ENSMUST00000061073 957 ntBASIC30.37■■■□□ 2.45
Scn7aB1AYL1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Scn7aB1AYL1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Scn7aB1AYL1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Scn7aB1AYL1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Scn7aB1AYL1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.35■■■□□ 2.45
Scn7aB1AYL1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Scn7aB1AYL1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Scn7aB1AYL1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Scn7aB1AYL1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.35■■■□□ 2.45
Scn7aB1AYL1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Scn7aB1AYL1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Scn7aB1AYL1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Scn7aB1AYL1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
Scn7aB1AYL1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Scn7aB1AYL1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Scn7aB1AYL1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Scn7aB1AYL1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Scn7aB1AYL1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Scn7aB1AYL1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Scn7aB1AYL1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Scn7aB1AYL1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC30.3■■■□□ 2.44
Scn7aB1AYL1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Scn7aB1AYL1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scn7aB1AYL1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Scn7aB1AYL1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30.29■■■□□ 2.44
Scn7aB1AYL1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Scn7aB1AYL1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scn7aB1AYL1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Scn7aB1AYL1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Scn7aB1AYL1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Scn7aB1AYL1 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.28■■■□□ 2.44
Scn7aB1AYL1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Scn7aB1AYL1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Scn7aB1AYL1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Scn7aB1AYL1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Scn7aB1AYL1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Scn7aB1AYL1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Scn7aB1AYL1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Scn7aB1AYL1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Scn7aB1AYL1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.23■■■□□ 2.43
Scn7aB1AYL1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Scn7aB1AYL1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Scn7aB1AYL1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Scn7aB1AYL1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.22■■■□□ 2.43
Scn7aB1AYL1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Scn7aB1AYL1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC30.21■■■□□ 2.43
Scn7aB1AYL1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Scn7aB1AYL1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30.2■■■□□ 2.42
Scn7aB1AYL1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Scn7aB1AYL1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
Scn7aB1AYL1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Scn7aB1AYL1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Scn7aB1AYL1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Scn7aB1AYL1 Gm43566-201ENSMUST00000196851 808 ntBASIC30.17■■■□□ 2.42
Scn7aB1AYL1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Scn7aB1AYL1 Gm43592-201ENSMUST00000196922 1165 ntBASIC30.17■■■□□ 2.42
Scn7aB1AYL1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC30.17■■■□□ 2.42
Scn7aB1AYL1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.17■■■□□ 2.42
Scn7aB1AYL1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Scn7aB1AYL1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30.16■■■□□ 2.42
Scn7aB1AYL1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Scn7aB1AYL1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.15■■■□□ 2.42
Scn7aB1AYL1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 195.3 ms