Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.66■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Notumos-201ENSMUST00000151998 2659 ntBASIC16.65■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trdv2-1A0A0G2JGB9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.59■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trdv2-1A0A0G2JGB9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trdv2-1A0A0G2JGB9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Gm26115-201ENSMUST00000175605 87 ntBASIC16.55■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.53■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trdv2-1A0A0G2JGB9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trdv2-1A0A0G2JGB9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms