Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9d-4A0A0G2JG37 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9d-4A0A0G2JG37 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav9d-4A0A0G2JG37 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-4A0A0G2JG37 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-4A0A0G2JG37 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-4A0A0G2JG37 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav9d-4A0A0G2JG37 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav9d-4A0A0G2JG37 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-4A0A0G2JG37 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav9d-4A0A0G2JG37 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-4A0A0G2JG37 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav9d-4A0A0G2JG37 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-4A0A0G2JG37 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-4A0A0G2JG37 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-4A0A0G2JG37 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-4A0A0G2JG37 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-4A0A0G2JG37 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-4A0A0G2JG37 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-4A0A0G2JG37 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-4A0A0G2JG37 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-4A0A0G2JG37 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-4A0A0G2JG37 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-4A0A0G2JG37 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav9d-4A0A0G2JG37 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Trav9d-4A0A0G2JG37 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9d-4A0A0G2JG37 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav9d-4A0A0G2JG37 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9d-4A0A0G2JG37 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9d-4A0A0G2JG37 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav9d-4A0A0G2JG37 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trav9d-4A0A0G2JG37 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9d-4A0A0G2JG37 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9d-4A0A0G2JG37 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav9d-4A0A0G2JG37 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav9d-4A0A0G2JG37 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-4A0A0G2JG37 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-4A0A0G2JG37 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-4A0A0G2JG37 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-4A0A0G2JG37 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9d-4A0A0G2JG37 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9d-4A0A0G2JG37 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9d-4A0A0G2JG37 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms