Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv4-53A0A0G2JFC6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.96■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv4-53A0A0G2JFC6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv4-53A0A0G2JFC6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv4-53A0A0G2JFC6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Gm37136-201ENSMUST00000194368 194 ntBASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.91■□□□□ 0.14
Igkv4-53A0A0G2JFC6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.9■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Igkv4-53A0A0G2JFC6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv4-53A0A0G2JFC6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv4-53A0A0G2JFC6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Igkv4-53A0A0G2JFC6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv4-53A0A0G2JFC6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 1026.6 ms