Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV22A0A0B4J277 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV22A0A0B4J277 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV22A0A0B4J277 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV22A0A0B4J277 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV22A0A0B4J277 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 INO80B-203ENST00000409917 796 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV22A0A0B4J277 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV22A0A0B4J277 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAV22A0A0B4J277 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV22A0A0B4J277 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV22A0A0B4J277 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV22A0A0B4J277 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV22A0A0B4J277 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV22A0A0B4J277 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV22A0A0B4J277 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV22A0A0B4J277 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV22A0A0B4J277 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV22A0A0B4J277 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV22A0A0B4J277 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAV22A0A0B4J277 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV22A0A0B4J277 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV22A0A0B4J277 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV22A0A0B4J277 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV22A0A0B4J277 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV22A0A0B4J277 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV22A0A0B4J277 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV22A0A0B4J277 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 AC079834.2-201ENST00000609776 1949 ntBASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV22A0A0B4J277 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV22A0A0B4J277 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV22A0A0B4J277 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV22A0A0B4J277 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV22A0A0B4J277 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV22A0A0B4J277 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRAV22A0A0B4J277 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV22A0A0B4J277 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms