Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC135983.2-203ENST00000454486 1613 ntBASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 AC091060.1-201ENST00000623524 1766 ntBASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV13-1A0A0B4J241 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV13-1A0A0B4J241 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV13-1A0A0B4J241 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV13-1A0A0B4J241 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV13-1A0A0B4J241 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 WHAMMP2-203ENST00000563942 1603 ntBASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV13-1A0A0B4J241 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 AC005559.1-201ENST00000589661 871 ntBASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV13-1A0A0B4J241 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
TRAV13-1A0A0B4J241 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV13-1A0A0B4J241 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV13-1A0A0B4J241 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV13-1A0A0B4J241 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV13-1A0A0B4J241 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRAV13-1A0A0B4J241 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV13-1A0A0B4J241 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 AC108673.1-201ENST00000510422 1159 ntBASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAV13-1A0A0B4J241 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV13-1A0A0B4J241 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV13-1A0A0B4J241 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV13-1A0A0B4J241 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV13-1A0A0B4J241 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV13-1A0A0B4J241 AC145676.1-201ENST00000514988 2004 ntBASIC17.11■□□□□ 0.33
TRAV13-1A0A0B4J241 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV13-1A0A0B4J241 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV13-1A0A0B4J241 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV13-1A0A0B4J241 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV13-1A0A0B4J241 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV13-1A0A0B4J241 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAV13-1A0A0B4J241 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV13-1A0A0B4J241 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV13-1A0A0B4J241 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV13-1A0A0B4J241 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV13-1A0A0B4J241 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV13-1A0A0B4J241 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV13-1A0A0B4J241 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 SUZ12P1-203ENST00000578195 985 ntBASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV13-1A0A0B4J241 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 LINC00273-201ENST00000539813 1452 ntBASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 MIR6090-201ENST00000622481 60 ntBASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms