Protein–RNA interactions for Protein: A0A0B4J1P3

Ighv9-1, Immunoglobulin heavy variable 9-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-1A0A0B4J1P3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv9-1A0A0B4J1P3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.31■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.29■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv9-1A0A0B4J1P3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.27■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-1A0A0B4J1P3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.23■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Nkain2-201ENSMUST00000092602 558 ntBASIC17.23■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv9-1A0A0B4J1P3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.2■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.18■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv9-1A0A0B4J1P3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv9-1A0A0B4J1P3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms