Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv3A0A0A6YYE2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv3A0A0A6YYE2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv3A0A0A6YYE2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv3A0A0A6YYE2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv3A0A0A6YYE2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv3A0A0A6YYE2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv3A0A0A6YYE2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv3A0A0A6YYE2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv3A0A0A6YYE2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv3A0A0A6YYE2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv3A0A0A6YYE2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv3A0A0A6YYE2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv3A0A0A6YYE2 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.59■□□□□ 0.41
Trbv3A0A0A6YYE2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv3A0A0A6YYE2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv3A0A0A6YYE2 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.58■□□□□ 0.41
Trbv3A0A0A6YYE2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Trbv3A0A0A6YYE2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv3A0A0A6YYE2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv3A0A0A6YYE2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trbv3A0A0A6YYE2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv3A0A0A6YYE2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv3A0A0A6YYE2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv3A0A0A6YYE2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv3A0A0A6YYE2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv3A0A0A6YYE2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv3A0A0A6YYE2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.53■□□□□ 0.4
Trbv3A0A0A6YYE2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv3A0A0A6YYE2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv3A0A0A6YYE2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv3A0A0A6YYE2 Gm16148-201ENSMUST00000119653 893 ntBASIC17.52■□□□□ 0.4
Trbv3A0A0A6YYE2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv3A0A0A6YYE2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv3A0A0A6YYE2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv3A0A0A6YYE2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv3A0A0A6YYE2 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.51■□□□□ 0.39
Trbv3A0A0A6YYE2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trbv3A0A0A6YYE2 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.49■□□□□ 0.39
Trbv3A0A0A6YYE2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.49■□□□□ 0.39
Trbv3A0A0A6YYE2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv3A0A0A6YYE2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.49■□□□□ 0.39
Trbv3A0A0A6YYE2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trbv3A0A0A6YYE2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv3A0A0A6YYE2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trbv3A0A0A6YYE2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.48■□□□□ 0.39
Trbv3A0A0A6YYE2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv3A0A0A6YYE2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trbv3A0A0A6YYE2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trbv3A0A0A6YYE2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv3A0A0A6YYE2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv3A0A0A6YYE2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv3A0A0A6YYE2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv3A0A0A6YYE2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.46■□□□□ 0.39
Trbv3A0A0A6YYE2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Gm30023-201ENSMUST00000197970 889 ntBASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv3A0A0A6YYE2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv3A0A0A6YYE2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 188.2 ms