Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-42A0A0A6YY38 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-42A0A0A6YY38 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-42A0A0A6YY38 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.28■■□□□ 1
Ighv1-42A0A0A6YY38 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-42A0A0A6YY38 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-42A0A0A6YY38 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ighv1-42A0A0A6YY38 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ighv1-42A0A0A6YY38 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-42A0A0A6YY38 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.26■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ighv1-42A0A0A6YY38 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-42A0A0A6YY38 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm44428-201ENSMUST00000204474 874 ntBASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv1-42A0A0A6YY38 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.24■□□□□ 0.99
Ighv1-42A0A0A6YY38 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-42A0A0A6YY38 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-42A0A0A6YY38 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm10420-201ENSMUST00000121713 882 ntBASIC21.23■□□□□ 0.99
Ighv1-42A0A0A6YY38 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-42A0A0A6YY38 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-42A0A0A6YY38 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-42A0A0A6YY38 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-42A0A0A6YY38 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.22■□□□□ 0.99
Ighv1-42A0A0A6YY38 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-42A0A0A6YY38 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv1-42A0A0A6YY38 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ighv1-42A0A0A6YY38 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ighv1-42A0A0A6YY38 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-42A0A0A6YY38 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.2■□□□□ 0.98
Ighv1-42A0A0A6YY38 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ighv1-42A0A0A6YY38 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.19■□□□□ 0.98
Ighv1-42A0A0A6YY38 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-42A0A0A6YY38 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Ighv1-42A0A0A6YY38 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-42A0A0A6YY38 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-42A0A0A6YY38 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-42A0A0A6YY38 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-42A0A0A6YY38 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-42A0A0A6YY38 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ighv1-42A0A0A6YY38 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.18■□□□□ 0.98
Ighv1-42A0A0A6YY38 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-42A0A0A6YY38 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ighv1-42A0A0A6YY38 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-42A0A0A6YY38 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-42A0A0A6YY38 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.16■□□□□ 0.98
Ighv1-42A0A0A6YY38 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ighv1-42A0A0A6YY38 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-42A0A0A6YY38 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.15■□□□□ 0.98
Ighv1-42A0A0A6YY38 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ighv1-42A0A0A6YY38 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ighv1-42A0A0A6YY38 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.14■□□□□ 0.97
Ighv1-42A0A0A6YY38 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-42A0A0A6YY38 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-42A0A0A6YY38 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-42A0A0A6YY38 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-42A0A0A6YY38 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-42A0A0A6YY38 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ighv1-42A0A0A6YY38 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-42A0A0A6YY38 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-42A0A0A6YY38 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-42A0A0A6YY38 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-42A0A0A6YY38 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-42A0A0A6YY38 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-42A0A0A6YY38 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.1■□□□□ 0.97
Ighv1-42A0A0A6YY38 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ighv1-42A0A0A6YY38 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.09■□□□□ 0.97
Ighv1-42A0A0A6YY38 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-42A0A0A6YY38 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-42A0A0A6YY38 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-42A0A0A6YY38 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-42A0A0A6YY38 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-42A0A0A6YY38 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-42A0A0A6YY38 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-42A0A0A6YY38 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-42A0A0A6YY38 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms