Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9d-1A0A075B699 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-1A0A075B699 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-1A0A075B699 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-1A0A075B699 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav9d-1A0A075B699 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9d-1A0A075B699 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9d-1A0A075B699 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav9d-1A0A075B699 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav9d-1A0A075B699 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav9d-1A0A075B699 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav9d-1A0A075B699 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav9d-1A0A075B699 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9d-1A0A075B699 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav9d-1A0A075B699 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.4■□□□□ 0.38
Trav9d-1A0A075B699 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav9d-1A0A075B699 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav9d-1A0A075B699 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav9d-1A0A075B699 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-1A0A075B699 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.39■□□□□ 0.37
Trav9d-1A0A075B699 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav9d-1A0A075B699 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav9d-1A0A075B699 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.39■□□□□ 0.37
Trav9d-1A0A075B699 Gm6821-201ENSMUST00000107540 542 ntBASIC17.38■□□□□ 0.37
Trav9d-1A0A075B699 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-1A0A075B699 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav9d-1A0A075B699 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav9d-1A0A075B699 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-1A0A075B699 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-1A0A075B699 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-1A0A075B699 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-1A0A075B699 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-1A0A075B699 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav9d-1A0A075B699 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trav9d-1A0A075B699 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav9d-1A0A075B699 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-1A0A075B699 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav9d-1A0A075B699 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav9d-1A0A075B699 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-1A0A075B699 Gm37136-201ENSMUST00000194368 194 ntBASIC17.35■□□□□ 0.37
Trav9d-1A0A075B699 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-1A0A075B699 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.35■□□□□ 0.37
Trav9d-1A0A075B699 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-1A0A075B699 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav9d-1A0A075B699 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-1A0A075B699 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.34■□□□□ 0.37
Trav9d-1A0A075B699 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-1A0A075B699 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-1A0A075B699 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-1A0A075B699 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav9d-1A0A075B699 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9d-1A0A075B699 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav9d-1A0A075B699 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.33■□□□□ 0.37
Trav9d-1A0A075B699 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav9d-1A0A075B699 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav9d-1A0A075B699 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav9d-1A0A075B699 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-1A0A075B699 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-1A0A075B699 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-1A0A075B699 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-1A0A075B699 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav9d-1A0A075B699 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav9d-1A0A075B699 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav9d-1A0A075B699 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Trav9d-1A0A075B699 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms