Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-4A0A075B631 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.47■□□□□ 0.07
Trav9n-4A0A075B631 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9n-4A0A075B631 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav9n-4A0A075B631 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav9n-4A0A075B631 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9n-4A0A075B631 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav9n-4A0A075B631 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.45■□□□□ 0.06
Trav9n-4A0A075B631 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.45■□□□□ 0.06
Trav9n-4A0A075B631 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-4A0A075B631 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav9n-4A0A075B631 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-4A0A075B631 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-4A0A075B631 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-4A0A075B631 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-4A0A075B631 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-4A0A075B631 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav9n-4A0A075B631 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.43■□□□□ 0.06
Trav9n-4A0A075B631 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.43■□□□□ 0.06
Trav9n-4A0A075B631 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav9n-4A0A075B631 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav9n-4A0A075B631 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-4A0A075B631 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-4A0A075B631 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-4A0A075B631 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-4A0A075B631 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav9n-4A0A075B631 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-4A0A075B631 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav9n-4A0A075B631 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav9n-4A0A075B631 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav9n-4A0A075B631 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav9n-4A0A075B631 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav9n-4A0A075B631 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav9n-4A0A075B631 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav9n-4A0A075B631 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav9n-4A0A075B631 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav9n-4A0A075B631 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-4A0A075B631 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-4A0A075B631 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-4A0A075B631 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-4A0A075B631 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav9n-4A0A075B631 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Gm6821-201ENSMUST00000107540 542 ntBASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Gm42699-201ENSMUST00000198104 1657 ntBASIC15.35■□□□□ 0.05
Trav9n-4A0A075B631 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-4A0A075B631 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-4A0A075B631 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-4A0A075B631 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-4A0A075B631 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav9n-4A0A075B631 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav9n-4A0A075B631 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav9n-4A0A075B631 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav9n-4A0A075B631 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Gm37136-201ENSMUST00000194368 194 ntBASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav9n-4A0A075B631 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms