Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.6■□□□□ 0.73
Trav5-1A0A075B5Z7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav5-1A0A075B5Z7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav5-1A0A075B5Z7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5-1A0A075B5Z7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5-1A0A075B5Z7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5-1A0A075B5Z7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5-1A0A075B5Z7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav5-1A0A075B5Z7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav5-1A0A075B5Z7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav5-1A0A075B5Z7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav5-1A0A075B5Z7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav5-1A0A075B5Z7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav5-1A0A075B5Z7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav5-1A0A075B5Z7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Cap2-205ENSMUST00000225824 1634 ntBASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav5-1A0A075B5Z7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav5-1A0A075B5Z7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav5-1A0A075B5Z7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav5-1A0A075B5Z7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav5-1A0A075B5Z7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav5-1A0A075B5Z7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.53■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm12366-201ENSMUST00000121722 873 ntBASIC19.53■□□□□ 0.72
Trav5-1A0A075B5Z7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav5-1A0A075B5Z7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.53■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm5786-201ENSMUST00000085368 882 ntBASIC19.53■□□□□ 0.72
Trav5-1A0A075B5Z7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav5-1A0A075B5Z7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav5-1A0A075B5Z7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav5-1A0A075B5Z7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav5-1A0A075B5Z7 Gm44428-201ENSMUST00000204474 874 ntBASIC19.52■□□□□ 0.72
Trav5-1A0A075B5Z7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav5-1A0A075B5Z7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.51■□□□□ 0.71
Trav5-1A0A075B5Z7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav5-1A0A075B5Z7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav5-1A0A075B5Z7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav5-1A0A075B5Z7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.5■□□□□ 0.71
Trav5-1A0A075B5Z7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav5-1A0A075B5Z7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trav5-1A0A075B5Z7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm14523-201ENSMUST00000117260 558 ntBASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm27502-201ENSMUST00000183495 199 ntBASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trav5-1A0A075B5Z7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5-1A0A075B5Z7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 Gm7332-201ENSMUST00000118351 454 ntBASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Trav5-1A0A075B5Z7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms