Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gm44335-201ENSMUST00000196879 141 ntBASIC27.53■■■□□ 2
Rtl1Q7M732 Gm44297-201ENSMUST00000198304 141 ntBASIC27.53■■■□□ 2
Rtl1Q7M732 Gm44346-201ENSMUST00000198851 141 ntBASIC27.53■■■□□ 2
Rtl1Q7M732 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rtl1Q7M732 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rtl1Q7M732 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 AC025913.2-201ENSMUST00000220136 1766 ntBASIC27.52■■■□□ 2
Rtl1Q7M732 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC27.52■■■□□ 2
Rtl1Q7M732 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC27.52■■■□□ 2
Rtl1Q7M732 Gm11839-201ENSMUST00000120647 1953 ntBASIC27.52■■■□□ 2
Rtl1Q7M732 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC27.52■■■□□ 2
Rtl1Q7M732 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC27.52■■■□□ 2
Rtl1Q7M732 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC27.52■■■□□ 2
Rtl1Q7M732 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Rtl1Q7M732 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC27.51■■■□□ 2
Rtl1Q7M732 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Mir7036b-201ENSMUST00000184791 63 ntBASIC27.51■■□□□ 1.99
Rtl1Q7M732 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rtl1Q7M732 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC27.5■■□□□ 1.99
Rtl1Q7M732 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC27.5■■□□□ 1.99
Rtl1Q7M732 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Nrn1-204ENSMUST00000224323 1779 ntBASIC27.49■■□□□ 1.99
Rtl1Q7M732 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC27.49■■□□□ 1.99
Rtl1Q7M732 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Rtl1Q7M732 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Rtl1Q7M732 AC130669.1-201ENSMUST00000228537 1672 ntBASIC27.48■■□□□ 1.99
Rtl1Q7M732 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC27.48■■□□□ 1.99
Rtl1Q7M732 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC27.47■■□□□ 1.99
Rtl1Q7M732 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC27.47■■□□□ 1.99
Rtl1Q7M732 Gm10154-201ENSMUST00000084445 354 ntBASIC27.47■■□□□ 1.99
Rtl1Q7M732 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC27.47■■□□□ 1.99
Rtl1Q7M732 Gm5312-201ENSMUST00000203728 547 ntBASIC27.47■■□□□ 1.99
Rtl1Q7M732 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Mir1895-201ENSMUST00000122615 79 ntBASIC27.46■■□□□ 1.99
Rtl1Q7M732 Mir6990-201ENSMUST00000183724 91 ntBASIC27.46■■□□□ 1.99
Rtl1Q7M732 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtl1Q7M732 CT010478.1-201ENSMUST00000220747 2787 ntBASIC27.46■■□□□ 1.99
Rtl1Q7M732 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Rtl1Q7M732 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Rtl1Q7M732 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms