Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC23.16■■□□□ 1.3
NclP09405 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
NclP09405 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NclP09405 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NclP09405 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC23.15■■□□□ 1.3
NclP09405 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC23.15■■□□□ 1.3
NclP09405 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NclP09405 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC23.15■■□□□ 1.3
NclP09405 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 AC122024.2-201ENSMUST00000220086 871 ntBASIC23.15■■□□□ 1.3
NclP09405 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NclP09405 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NclP09405 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NclP09405 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NclP09405 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NclP09405 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NclP09405 Mir8117-201ENSMUST00000184773 107 ntBASIC23.14■■□□□ 1.29
NclP09405 Gm2756-201ENSMUST00000195851 400 ntBASIC23.14■■□□□ 1.29
NclP09405 Gm9682-201ENSMUST00000197505 556 ntBASIC23.14■■□□□ 1.29
NclP09405 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC23.14■■□□□ 1.29
NclP09405 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NclP09405 AC158538.2-201ENSMUST00000225455 906 ntBASIC23.14■■□□□ 1.29
NclP09405 AC147366.1-201ENSMUST00000227671 852 ntBASIC23.14■■□□□ 1.29
NclP09405 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NclP09405 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NclP09405 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC23.13■■□□□ 1.29
NclP09405 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
NclP09405 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Gm25925-201ENSMUST00000158314 306 ntBASIC23.13■■□□□ 1.29
NclP09405 Gm6736-201ENSMUST00000166583 948 ntBASIC23.13■■□□□ 1.29
NclP09405 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC23.13■■□□□ 1.29
NclP09405 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Gm27300-201ENSMUST00000184085 97 ntBASIC23.13■■□□□ 1.29
NclP09405 Gm27702-201ENSMUST00000184512 56 ntBASIC23.13■■□□□ 1.29
NclP09405 Gm27335-201ENSMUST00000184758 97 ntBASIC23.13■■□□□ 1.29
NclP09405 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC23.13■■□□□ 1.29
NclP09405 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 AC151836.1-202ENSMUST00000226259 753 ntBASIC23.13■■□□□ 1.29
NclP09405 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NclP09405 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC23.13■■□□□ 1.29
NclP09405 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC23.13■■□□□ 1.29
NclP09405 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
NclP09405 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NclP09405 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
NclP09405 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NclP09405 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC23.12■■□□□ 1.29
NclP09405 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC23.12■■□□□ 1.29
NclP09405 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC23.12■■□□□ 1.29
NclP09405 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Mir3113-201ENSMUST00000175478 76 ntBASIC23.12■■□□□ 1.29
NclP09405 AC174742.1-201ENSMUST00000218272 304 ntBASIC23.12■■□□□ 1.29
NclP09405 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NclP09405 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms