Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 RAF1-204ENST00000432427 1831 ntTSL 57.64□□□□□ -1.198e-10■□□□□ 9.1
SMNDC1O75940 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.26□□□□□ -1.253e-6■□□□□ 9.1
SMNDC1O75940 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.12□□□□□ -1.273e-6■□□□□ 9.1
SMNDC1O75940 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.33e-6■□□□□ 9.1
SMNDC1O75940 RAF1-206ENST00000460610 484 ntTSL 36.91□□□□□ -1.38e-10■□□□□ 9.1
SMNDC1O75940 NDUFV2-203ENST00000465096 643 ntTSL 26.67□□□□□ -1.343e-6■□□□□ 9.1
SMNDC1O75940 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.62□□□□□ -1.353e-6■□□□□ 9.1
SMNDC1O75940 UCK2-203ENST00000463772 599 ntTSL 56.56□□□□□ -1.363e-6■□□□□ 9.1
SMNDC1O75940 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.373e-6■□□□□ 9.1
SMNDC1O75940 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.08□□□□□ -1.443e-6■□□□□ 9.1
SMNDC1O75940 HM13-225ENST00000619859 455 ntTSL 36.08□□□□□ -1.448e-10■□□□□ 9.1
SMNDC1O75940 UCK2-204ENST00000464197 811 ntTSL 45.89□□□□□ -1.473e-6■□□□□ 9.1
SMNDC1O75940 AMPD2-213ENST00000524975 678 ntTSL 316.71■□□□□ 0.277e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.78■□□□□ 0.127e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-215ENST00000526301 2354 ntTSL 1 (best)15.49■□□□□ 0.077e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 07e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-214ENST00000525415 580 ntTSL 414.97□□□□□ -0.017e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC13.39□□□□□ -0.277e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.427e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-204ENST00000369840 3130 ntAPPRIS ALT2 TSL 511.41□□□□□ -0.587e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC11.19□□□□□ -0.627e-13■□□□□ 9.1
SMNDC1O75940 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC10.59□□□□□ -0.717e-13■□□□□ 9.1
SMNDC1O75940 TAF1D-218ENST00000533794 505 ntTSL 29.3□□□□□ -0.924e-39■□□□□ 9.1
SMNDC1O75940 TAF1D-212ENST00000529794 1123 ntTSL 29.28□□□□□ -0.924e-39■□□□□ 9.1
SMNDC1O75940 DCXR-217ENST00000582613 617 ntTSL 223.28■■□□□ 1.327e-6■□□□□ 9.1
SMNDC1O75940 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.152e-7■□□□□ 9.1
SMNDC1O75940 DCXR-220ENST00000585085 927 ntTSL 521.52■■□□□ 1.047e-6■□□□□ 9.1
SMNDC1O75940 CTSZ-204ENST00000503833 955 ntTSL 1 (best)19.96■□□□□ 0.792e-7■□□□□ 9.1
SMNDC1O75940 DCXR-213ENST00000580320 915 ntTSL 219.5■□□□□ 0.717e-6■□□□□ 9.1
SMNDC1O75940 FARSA-203ENST00000586146 1707 ntTSL 519.48■□□□□ 0.717e-6■□□□□ 9.1
SMNDC1O75940 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.77e-6■□□□□ 9.1
SMNDC1O75940 DCXR-221ENST00000585164 475 ntTSL 519.4■□□□□ 0.77e-6■□□□□ 9.1
SMNDC1O75940 DCXR-206ENST00000578273 877 ntTSL 519.3■□□□□ 0.687e-6■□□□□ 9.1
SMNDC1O75940 CRKL-202ENST00000411769 2037 ntTSL 1 (best)19.27■□□□□ 0.684e-8■□□□□ 9.1
SMNDC1O75940 DCXR-210ENST00000579334 1251 ntTSL 519.07■□□□□ 0.647e-6■□□□□ 9.1
SMNDC1O75940 DCXR-207ENST00000578885 968 ntTSL 519.01■□□□□ 0.637e-6■□□□□ 9.1
SMNDC1O75940 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.67e-6■□□□□ 9.1
SMNDC1O75940 DCXR-214ENST00000580750 1076 ntTSL 518.66■□□□□ 0.587e-6■□□□□ 9.1
SMNDC1O75940 GATA2-204ENST00000489987 1433 ntTSL 218.36■□□□□ 0.537e-6■□□□□ 9.1
SMNDC1O75940 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.514e-8■□□□□ 9.1
SMNDC1O75940 DCXR-218ENST00000582900 676 ntTSL 318.13■□□□□ 0.497e-6■□□□□ 9.1
SMNDC1O75940 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.03■□□□□ 0.487e-6■□□□□ 9.1
SMNDC1O75940 FARSA-208ENST00000588965 1831 ntTSL 518.01■□□□□ 0.477e-6■□□□□ 9.1
SMNDC1O75940 PSMD12-205ENST00000579365 560 ntTSL 417.94■□□□□ 0.467e-6■□□□□ 9.1
SMNDC1O75940 DCXR-215ENST00000581584 766 ntTSL 317.65■□□□□ 0.427e-6■□□□□ 9.1
SMNDC1O75940 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.24■□□□□ 0.357e-6■□□□□ 9.1
SMNDC1O75940 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.2■□□□□ 0.347e-6■□□□□ 9.1
SMNDC1O75940 FARSA-209ENST00000592662 864 ntTSL 1 (best)17.17■□□□□ 0.347e-6■□□□□ 9.1
SMNDC1O75940 FARSA-210ENST00000593021 1135 ntTSL 516.91■□□□□ 0.37e-6■□□□□ 9.1
SMNDC1O75940 PSMD12-207ENST00000584008 1752 ntTSL 1 (best)16.84■□□□□ 0.297e-6■□□□□ 9.1
SMNDC1O75940 PSMD12-206ENST00000581618 613 ntTSL 416.48■□□□□ 0.237e-6■□□□□ 9.1
SMNDC1O75940 DCXR-209ENST00000579155 430 ntTSL 516.4■□□□□ 0.227e-6■□□□□ 9.1
SMNDC1O75940 FARSA-206ENST00000587981 521 ntTSL 216.39■□□□□ 0.217e-6■□□□□ 9.1
SMNDC1O75940 PSMD12-208ENST00000584289 1090 ntTSL 1 (best)16.28■□□□□ 0.27e-6■□□□□ 9.1
SMNDC1O75940 CTSZ-203ENST00000488395 647 ntTSL 215.38■□□□□ 0.052e-7■□□□□ 9.1
SMNDC1O75940 PSMD12-204ENST00000578015 448 ntTSL 215.08■□□□□ 07e-6■□□□□ 9.1
SMNDC1O75940 DCXR-204ENST00000577712 429 ntTSL 514□□□□□ -0.177e-6■□□□□ 9.1
SMNDC1O75940 DCXR-219ENST00000584318 284 ntTSL 513.52□□□□□ -0.257e-6■□□□□ 9.1
SMNDC1O75940 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.277e-6■□□□□ 9.1
SMNDC1O75940 PUM2-211ENST00000446940 525 ntTSL 413.11□□□□□ -0.317e-6■□□□□ 9.1
SMNDC1O75940 PUM2-206ENST00000424110 546 ntTSL 412.57□□□□□ -0.47e-6■□□□□ 9.1
SMNDC1O75940 FARSA-204ENST00000586280 803 ntTSL 312.12□□□□□ -0.477e-6■□□□□ 9.1
SMNDC1O75940 DGAT1-203ENST00000524965 1336 ntTSL 511.99□□□□□ -0.497e-6■□□□□ 9.1
SMNDC1O75940 PUM2-210ENST00000442400 955 ntTSL 57.65□□□□□ -1.187e-6■□□□□ 9.1
SMNDC1O75940 PUM2-208ENST00000432105 584 ntTSL 57□□□□□ -1.297e-6■□□□□ 9.1
SMNDC1O75940 STAT2-208ENST00000557156 539 ntTSL 46.96□□□□□ -1.37e-6■□□□□ 9.1
SMNDC1O75940 DGAT1-202ENST00000524844 401 ntTSL 36.84□□□□□ -1.317e-6■□□□□ 9.1
SMNDC1O75940 PUM2-207ENST00000429419 547 ntTSL 55.76□□□□□ -1.497e-6■□□□□ 9.1
SMNDC1O75940 PUM2-205ENST00000420234 562 ntTSL 55.43□□□□□ -1.547e-6■□□□□ 9.1
SMNDC1O75940 SLC3A2-222ENST00000546253 582 ntTSL 413.61□□□□□ -0.233e-10■□□□□ 9.1
SMNDC1O75940 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.033e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.58■□□□□ 0.573e-6■□□□□ 9.1
SMNDC1O75940 PLXNB1-206ENST00000462738 663 ntTSL 218.29■□□□□ 0.523e-6■□□□□ 9.1
SMNDC1O75940 COASY-213ENST00000591753 2225 ntTSL 1 (best)18.22■□□□□ 0.513e-6■□□□□ 9.1
SMNDC1O75940 ACADVL-206ENST00000577191 1212 ntTSL 217.6■□□□□ 0.413e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-217ENST00000475693 2237 ntTSL 217.57■□□□□ 0.43e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.273e-6■□□□□ 9.1
SMNDC1O75940 PLXNB1-217ENST00000484485 560 ntTSL 416.23■□□□□ 0.193e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.05■□□□□ 0.163e-6■□□□□ 9.1
SMNDC1O75940 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.143e-6■□□□□ 9.1
SMNDC1O75940 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.79■□□□□ 0.123e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-225ENST00000494465 2365 ntTSL 515.74■□□□□ 0.113e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)15.43■□□□□ 0.063e-6■□□□□ 9.1
SMNDC1O75940 ACADVL-225ENST00000581378 752 ntTSL 314.6□□□□□ -0.073e-6■□□□□ 9.1
SMNDC1O75940 COASY-209ENST00000588353 387 ntTSL 314.58□□□□□ -0.083e-6■□□□□ 9.1
SMNDC1O75940 ATG4B-201ENST00000344376 1566 ntTSL 514.45□□□□□ -0.13e-6■□□□□ 9.1
SMNDC1O75940 COASY-214ENST00000591779 994 ntTSL 214.02□□□□□ -0.173e-6■□□□□ 9.1
SMNDC1O75940 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.92□□□□□ -0.183e-6■□□□□ 9.1
SMNDC1O75940 MYL6-204ENST00000546630 544 ntTSL 1 (best)13.17□□□□□ -0.33e-6■□□□□ 9.1
SMNDC1O75940 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.343e-6■□□□□ 9.1
SMNDC1O75940 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.473e-6■□□□□ 9.1
SMNDC1O75940 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC11.65□□□□□ -0.553e-6■□□□□ 9.1
SMNDC1O75940 MYL6-208ENST00000547703 675 ntTSL 511.02□□□□□ -0.653e-6■□□□□ 9.1
SMNDC1O75940 MYL6-212ENST00000548725 582 ntTSL 210.99□□□□□ -0.653e-6■□□□□ 9.1
SMNDC1O75940 KDM5D-208ENST00000485154 792 ntTSL 29.12□□□□□ -0.953e-6■□□□□ 9.1
SMNDC1O75940 WDR59-217ENST00000569229 901 ntTSL 59.1□□□□□ -0.953e-6■□□□□ 9.1
SMNDC1O75940 MYL6-217ENST00000550639 419 ntTSL 58.51□□□□□ -1.053e-6■□□□□ 9.1
SMNDC1O75940 MYL6-214ENST00000549392 411 ntTSL 58.26□□□□□ -1.093e-6■□□□□ 9.1
SMNDC1O75940 FMNL2-203ENST00000492942 753 ntTSL 37.99□□□□□ -1.133e-6■□□□□ 9.1
SMNDC1O75940 MYL6B-203ENST00000548571 223 ntTSL 47.81□□□□□ -1.163e-6■□□□□ 9.1
Retrieved 100 of 11,362 protein–RNA pairs in 312.2 ms