Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NclP09405 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
NclP09405 Gm12260-201ENSMUST00000122447 411 ntBASIC23.37■■□□□ 1.33
NclP09405 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
NclP09405 Gm5682-201ENSMUST00000173402 505 ntBASIC23.37■■□□□ 1.33
NclP09405 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC23.37■■□□□ 1.33
NclP09405 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Gm37166-201ENSMUST00000195473 2474 ntBASIC23.37■■□□□ 1.33
NclP09405 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC23.37■■□□□ 1.33
NclP09405 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NclP09405 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC23.36■■□□□ 1.33
NclP09405 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NclP09405 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
NclP09405 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
NclP09405 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC23.36■■□□□ 1.33
NclP09405 Gm11594-201ENSMUST00000122313 162 ntBASIC23.36■■□□□ 1.33
NclP09405 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC23.36■■□□□ 1.33
NclP09405 AC093926.2-201ENSMUST00000214468 1228 ntBASIC23.36■■□□□ 1.33
NclP09405 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
NclP09405 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NclP09405 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Gm15358-201ENSMUST00000119249 520 ntBASIC23.35■■□□□ 1.33
NclP09405 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Gm9727-201ENSMUST00000161387 555 ntBASIC23.35■■□□□ 1.33
NclP09405 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NclP09405 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NclP09405 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NclP09405 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC23.34■■□□□ 1.33
NclP09405 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC23.34■■□□□ 1.33
NclP09405 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC23.34■■□□□ 1.33
NclP09405 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
NclP09405 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
NclP09405 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
NclP09405 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
NclP09405 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
NclP09405 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC23.33■■□□□ 1.33
NclP09405 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
NclP09405 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
NclP09405 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
NclP09405 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
NclP09405 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC23.33■■□□□ 1.33
NclP09405 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NclP09405 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC23.33■■□□□ 1.33
NclP09405 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms