Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ctla4P09793 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.72□□□□□ -0.05
Ctla4P09793 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.72□□□□□ -0.05
Ctla4P09793 Gm6376-201ENSMUST00000209407 580 ntBASIC14.72□□□□□ -0.05
Ctla4P09793 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.72□□□□□ -0.05
Ctla4P09793 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.72□□□□□ -0.05
Ctla4P09793 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.72□□□□□ -0.05
Ctla4P09793 Gm6296-201ENSMUST00000222599 943 ntBASIC14.72□□□□□ -0.05
Ctla4P09793 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ctla4P09793 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ctla4P09793 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ctla4P09793 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ctla4P09793 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Ctla4P09793 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ctla4P09793 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Gm12497-201ENSMUST00000138778 237 ntBASIC14.71□□□□□ -0.05
Ctla4P09793 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.71□□□□□ -0.05
Ctla4P09793 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.71□□□□□ -0.05
Ctla4P09793 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.71□□□□□ -0.05
Ctla4P09793 Rps4l-201ENSMUST00000071745 943 ntBASIC14.71□□□□□ -0.05
Ctla4P09793 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ctla4P09793 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Ctla4P09793 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ctla4P09793 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ctla4P09793 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ctla4P09793 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ctla4P09793 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ctla4P09793 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Ctla4P09793 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ctla4P09793 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ctla4P09793 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
Ctla4P09793 Gm8097-201ENSMUST00000117903 829 ntBASIC14.7□□□□□ -0.06
Ctla4P09793 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.7□□□□□ -0.06
Ctla4P09793 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.7□□□□□ -0.06
Ctla4P09793 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ctla4P09793 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ctla4P09793 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ctla4P09793 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ctla4P09793 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ctla4P09793 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.69□□□□□ -0.06
Ctla4P09793 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ctla4P09793 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms