Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.17■■■□□ 2.58
TNFRSF11AQ9Y6Q6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TNFRSF11AQ9Y6Q6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
TNFRSF11AQ9Y6Q6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TNFRSF11AQ9Y6Q6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.16■■■□□ 2.58
TNFRSF11AQ9Y6Q6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TNFRSF11AQ9Y6Q6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
TNFRSF11AQ9Y6Q6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.15■■■□□ 2.58
TNFRSF11AQ9Y6Q6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
TNFRSF11AQ9Y6Q6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TNFRSF11AQ9Y6Q6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
TNFRSF11AQ9Y6Q6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
TNFRSF11AQ9Y6Q6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
TNFRSF11AQ9Y6Q6 AC008813.1-201ENST00000536597 885 ntBASIC31.13■■■□□ 2.57
TNFRSF11AQ9Y6Q6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.13■■■□□ 2.57
TNFRSF11AQ9Y6Q6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
TNFRSF11AQ9Y6Q6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
TNFRSF11AQ9Y6Q6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TNFRSF11AQ9Y6Q6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TNFRSF11AQ9Y6Q6 MIR219A2-201ENST00000608502 1504 ntBASIC31.12■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
TNFRSF11AQ9Y6Q6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TNFRSF11AQ9Y6Q6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TNFRSF11AQ9Y6Q6 AC148477.6-201ENST00000623746 465 ntBASIC31.1■■■□□ 2.57
TNFRSF11AQ9Y6Q6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TNFRSF11AQ9Y6Q6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TNFRSF11AQ9Y6Q6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TNFRSF11AQ9Y6Q6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.08■■■□□ 2.57
TNFRSF11AQ9Y6Q6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TNFRSF11AQ9Y6Q6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
TNFRSF11AQ9Y6Q6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.07■■■□□ 2.56
TNFRSF11AQ9Y6Q6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
TNFRSF11AQ9Y6Q6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TNFRSF11AQ9Y6Q6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.06■■■□□ 2.56
TNFRSF11AQ9Y6Q6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.05■■■□□ 2.56
TNFRSF11AQ9Y6Q6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TNFRSF11AQ9Y6Q6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TNFRSF11AQ9Y6Q6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.04■■■□□ 2.56
TNFRSF11AQ9Y6Q6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.04■■■□□ 2.56
TNFRSF11AQ9Y6Q6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
TNFRSF11AQ9Y6Q6 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.03■■■□□ 2.56
TNFRSF11AQ9Y6Q6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TNFRSF11AQ9Y6Q6 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.03■■■□□ 2.56
TNFRSF11AQ9Y6Q6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
TNFRSF11AQ9Y6Q6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.02■■■□□ 2.56
TNFRSF11AQ9Y6Q6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
TNFRSF11AQ9Y6Q6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TNFRSF11AQ9Y6Q6 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.01■■■□□ 2.55
TNFRSF11AQ9Y6Q6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
TNFRSF11AQ9Y6Q6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TNFRSF11AQ9Y6Q6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TNFRSF11AQ9Y6Q6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TNFRSF11AQ9Y6Q6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
TNFRSF11AQ9Y6Q6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31■■■□□ 2.55
TNFRSF11AQ9Y6Q6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TNFRSF11AQ9Y6Q6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
TNFRSF11AQ9Y6Q6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TNFRSF11AQ9Y6Q6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
TNFRSF11AQ9Y6Q6 HSD17B1P1-201ENST00000590052 955 ntBASIC30.98■■■□□ 2.55
TNFRSF11AQ9Y6Q6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
TNFRSF11AQ9Y6Q6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.97■■■□□ 2.55
TNFRSF11AQ9Y6Q6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
TNFRSF11AQ9Y6Q6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
TNFRSF11AQ9Y6Q6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TNFRSF11AQ9Y6Q6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
TNFRSF11AQ9Y6Q6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
TNFRSF11AQ9Y6Q6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TNFRSF11AQ9Y6Q6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
TNFRSF11AQ9Y6Q6 AC018358.1-201ENST00000631079 1402 ntBASIC30.95■■■□□ 2.54
TNFRSF11AQ9Y6Q6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
TNFRSF11AQ9Y6Q6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.54
TNFRSF11AQ9Y6Q6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
TNFRSF11AQ9Y6Q6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
TNFRSF11AQ9Y6Q6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TNFRSF11AQ9Y6Q6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TNFRSF11AQ9Y6Q6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.93■■■□□ 2.54
TNFRSF11AQ9Y6Q6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
TNFRSF11AQ9Y6Q6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms