Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AC110285.7-201ENST00000624417 1536 ntBASIC29.87■■■□□ 2.37
CYP46A1Q9Y6A2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CYP46A1Q9Y6A2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CYP46A1Q9Y6A2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.87■■■□□ 2.37
CYP46A1Q9Y6A2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CYP46A1Q9Y6A2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CYP46A1Q9Y6A2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.86■■■□□ 2.37
CYP46A1Q9Y6A2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.86■■■□□ 2.37
CYP46A1Q9Y6A2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
CYP46A1Q9Y6A2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CYP46A1Q9Y6A2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CYP46A1Q9Y6A2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CYP46A1Q9Y6A2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CYP46A1Q9Y6A2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.83■■■□□ 2.37
CYP46A1Q9Y6A2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CYP46A1Q9Y6A2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CYP46A1Q9Y6A2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.82■■■□□ 2.36
CYP46A1Q9Y6A2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CYP46A1Q9Y6A2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CYP46A1Q9Y6A2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.81■■■□□ 2.36
CYP46A1Q9Y6A2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.81■■■□□ 2.36
CYP46A1Q9Y6A2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CYP46A1Q9Y6A2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
CYP46A1Q9Y6A2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CYP46A1Q9Y6A2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CYP46A1Q9Y6A2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
CYP46A1Q9Y6A2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CYP46A1Q9Y6A2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CYP46A1Q9Y6A2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CYP46A1Q9Y6A2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.78■■■□□ 2.36
CYP46A1Q9Y6A2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CYP46A1Q9Y6A2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
CYP46A1Q9Y6A2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.77■■■□□ 2.36
CYP46A1Q9Y6A2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.77■■■□□ 2.36
CYP46A1Q9Y6A2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CYP46A1Q9Y6A2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.76■■■□□ 2.35
CYP46A1Q9Y6A2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.76■■■□□ 2.35
CYP46A1Q9Y6A2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
CYP46A1Q9Y6A2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.76■■■□□ 2.35
CYP46A1Q9Y6A2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CYP46A1Q9Y6A2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CYP46A1Q9Y6A2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CYP46A1Q9Y6A2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CYP46A1Q9Y6A2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CYP46A1Q9Y6A2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
CYP46A1Q9Y6A2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CYP46A1Q9Y6A2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.73■■■□□ 2.35
CYP46A1Q9Y6A2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CYP46A1Q9Y6A2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CYP46A1Q9Y6A2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.72■■■□□ 2.35
CYP46A1Q9Y6A2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
CYP46A1Q9Y6A2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
CYP46A1Q9Y6A2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CYP46A1Q9Y6A2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.7■■■□□ 2.35
CYP46A1Q9Y6A2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CYP46A1Q9Y6A2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
CYP46A1Q9Y6A2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.7■■■□□ 2.35
CYP46A1Q9Y6A2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CYP46A1Q9Y6A2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC29.7■■■□□ 2.34
CYP46A1Q9Y6A2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CYP46A1Q9Y6A2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.69■■■□□ 2.34
CYP46A1Q9Y6A2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.68■■■□□ 2.34
CYP46A1Q9Y6A2 LINC01971-201ENST00000617888 1048 ntBASIC29.68■■■□□ 2.34
CYP46A1Q9Y6A2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.67■■■□□ 2.34
CYP46A1Q9Y6A2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
CYP46A1Q9Y6A2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
CYP46A1Q9Y6A2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.67■■■□□ 2.34
CYP46A1Q9Y6A2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.67■■■□□ 2.34
CYP46A1Q9Y6A2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.66■■■□□ 2.34
CYP46A1Q9Y6A2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.65■■■□□ 2.34
CYP46A1Q9Y6A2 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.65■■■□□ 2.34
CYP46A1Q9Y6A2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
CYP46A1Q9Y6A2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
CYP46A1Q9Y6A2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.64■■■□□ 2.34
CYP46A1Q9Y6A2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CYP46A1Q9Y6A2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CYP46A1Q9Y6A2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.63■■■□□ 2.33
CYP46A1Q9Y6A2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CYP46A1Q9Y6A2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CYP46A1Q9Y6A2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CYP46A1Q9Y6A2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
CYP46A1Q9Y6A2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.62■■■□□ 2.33
CYP46A1Q9Y6A2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CYP46A1Q9Y6A2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.62■■■□□ 2.33
CYP46A1Q9Y6A2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.61■■■□□ 2.33
CYP46A1Q9Y6A2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CYP46A1Q9Y6A2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CYP46A1Q9Y6A2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms