Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHA5Q9Y5H7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHA5Q9Y5H7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDHA5Q9Y5H7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PCDHA5Q9Y5H7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PCDHA5Q9Y5H7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.18■■■□□ 2.1
PCDHA5Q9Y5H7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHA5Q9Y5H7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.18■■■□□ 2.1
PCDHA5Q9Y5H7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.17■■■□□ 2.1
PCDHA5Q9Y5H7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHA5Q9Y5H7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.16■■■□□ 2.1
PCDHA5Q9Y5H7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
PCDHA5Q9Y5H7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.15■■■□□ 2.1
PCDHA5Q9Y5H7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHA5Q9Y5H7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA5Q9Y5H7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA5Q9Y5H7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHA5Q9Y5H7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.14■■■□□ 2.1
PCDHA5Q9Y5H7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHA5Q9Y5H7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA5Q9Y5H7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA5Q9Y5H7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
PCDHA5Q9Y5H7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHA5Q9Y5H7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.13■■■□□ 2.09
PCDHA5Q9Y5H7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHA5Q9Y5H7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHA5Q9Y5H7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.12■■■□□ 2.09
PCDHA5Q9Y5H7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHA5Q9Y5H7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.12■■■□□ 2.09
PCDHA5Q9Y5H7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDHA5Q9Y5H7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDHA5Q9Y5H7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDHA5Q9Y5H7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
PCDHA5Q9Y5H7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.1■■■□□ 2.09
PCDHA5Q9Y5H7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.1■■■□□ 2.09
PCDHA5Q9Y5H7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHA5Q9Y5H7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHA5Q9Y5H7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.08■■■□□ 2.09
PCDHA5Q9Y5H7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
PCDHA5Q9Y5H7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHA5Q9Y5H7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
PCDHA5Q9Y5H7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA5Q9Y5H7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA5Q9Y5H7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA5Q9Y5H7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA5Q9Y5H7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
PCDHA5Q9Y5H7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHA5Q9Y5H7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
PCDHA5Q9Y5H7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.05■■■□□ 2.08
PCDHA5Q9Y5H7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.04■■■□□ 2.08
PCDHA5Q9Y5H7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
PCDHA5Q9Y5H7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHA5Q9Y5H7 AC044849.2-201ENST00000606596 710 ntBASIC28.04■■■□□ 2.08
PCDHA5Q9Y5H7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.03■■■□□ 2.08
PCDHA5Q9Y5H7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
PCDHA5Q9Y5H7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.03■■■□□ 2.08
PCDHA5Q9Y5H7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PCDHA5Q9Y5H7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
PCDHA5Q9Y5H7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHA5Q9Y5H7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHA5Q9Y5H7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA5Q9Y5H7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
PCDHA5Q9Y5H7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PCDHA5Q9Y5H7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.01■■■□□ 2.07
PCDHA5Q9Y5H7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
PCDHA5Q9Y5H7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
PCDHA5Q9Y5H7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHA5Q9Y5H7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28■■■□□ 2.07
PCDHA5Q9Y5H7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
PCDHA5Q9Y5H7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA5Q9Y5H7 AC110285.7-201ENST00000624417 1536 ntBASIC27.99■■■□□ 2.07
PCDHA5Q9Y5H7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA5Q9Y5H7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.99■■■□□ 2.07
PCDHA5Q9Y5H7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHA5Q9Y5H7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHA5Q9Y5H7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.98■■■□□ 2.07
PCDHA5Q9Y5H7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHA5Q9Y5H7 AL449106.1-201ENST00000608517 1980 ntBASIC27.97■■■□□ 2.07
PCDHA5Q9Y5H7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHA5Q9Y5H7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.97■■■□□ 2.07
PCDHA5Q9Y5H7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHA5Q9Y5H7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHA5Q9Y5H7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
PCDHA5Q9Y5H7 AC021231.2-201ENST00000594613 730 ntBASIC27.96■■■□□ 2.07
PCDHA5Q9Y5H7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHA5Q9Y5H7 AC091060.1-201ENST00000623524 1766 ntBASIC27.96■■■□□ 2.07
PCDHA5Q9Y5H7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
PCDHA5Q9Y5H7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.94■■■□□ 2.06
PCDHA5Q9Y5H7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
PCDHA5Q9Y5H7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.93■■■□□ 2.06
PCDHA5Q9Y5H7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHA5Q9Y5H7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.92■■■□□ 2.06
PCDHA5Q9Y5H7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms