Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SCML2Q9UQR0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCML2Q9UQR0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.46■■□□□ 1.83
SCML2Q9UQR0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCML2Q9UQR0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
SCML2Q9UQR0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.45■■□□□ 1.83
SCML2Q9UQR0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SCML2Q9UQR0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
SCML2Q9UQR0 HSD17B1P1-201ENST00000590052 955 ntBASIC26.45■■□□□ 1.82
SCML2Q9UQR0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SCML2Q9UQR0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SCML2Q9UQR0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SCML2Q9UQR0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.44■■□□□ 1.82
SCML2Q9UQR0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SCML2Q9UQR0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SCML2Q9UQR0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCML2Q9UQR0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCML2Q9UQR0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCML2Q9UQR0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCML2Q9UQR0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
SCML2Q9UQR0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.41■■□□□ 1.82
SCML2Q9UQR0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCML2Q9UQR0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCML2Q9UQR0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCML2Q9UQR0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SCML2Q9UQR0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SCML2Q9UQR0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.4■■□□□ 1.82
SCML2Q9UQR0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.4■■□□□ 1.82
SCML2Q9UQR0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCML2Q9UQR0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.39■■□□□ 1.82
SCML2Q9UQR0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SCML2Q9UQR0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCML2Q9UQR0 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SCML2Q9UQR0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SCML2Q9UQR0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCML2Q9UQR0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCML2Q9UQR0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCML2Q9UQR0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCML2Q9UQR0 GPX1-201ENST00000419349 1106 ntBASIC26.36■■□□□ 1.81
SCML2Q9UQR0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCML2Q9UQR0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCML2Q9UQR0 DRD5P2-201ENST00000421395 2012 ntBASIC26.36■■□□□ 1.81
SCML2Q9UQR0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SCML2Q9UQR0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SCML2Q9UQR0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SCML2Q9UQR0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCML2Q9UQR0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCML2Q9UQR0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.35■■□□□ 1.81
SCML2Q9UQR0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.34■■□□□ 1.81
SCML2Q9UQR0 AC018358.1-201ENST00000631079 1402 ntBASIC26.34■■□□□ 1.81
SCML2Q9UQR0 AC022413.1-201ENST00000624602 984 ntBASIC26.34■■□□□ 1.81
SCML2Q9UQR0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.33■■□□□ 1.81
SCML2Q9UQR0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCML2Q9UQR0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.33■■□□□ 1.81
SCML2Q9UQR0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCML2Q9UQR0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
SCML2Q9UQR0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SCML2Q9UQR0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCML2Q9UQR0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.32■■□□□ 1.8
SCML2Q9UQR0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCML2Q9UQR0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
SCML2Q9UQR0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.31■■□□□ 1.8
SCML2Q9UQR0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.31■■□□□ 1.8
SCML2Q9UQR0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.3■■□□□ 1.8
SCML2Q9UQR0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
SCML2Q9UQR0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.29■■□□□ 1.8
SCML2Q9UQR0 AC060814.1-201ENST00000554326 538 ntBASIC26.29■■□□□ 1.8
SCML2Q9UQR0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.29■■□□□ 1.8
SCML2Q9UQR0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCML2Q9UQR0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.29■■□□□ 1.8
SCML2Q9UQR0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCML2Q9UQR0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCML2Q9UQR0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCML2Q9UQR0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
SCML2Q9UQR0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.27■■□□□ 1.8
SCML2Q9UQR0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.27■■□□□ 1.8
SCML2Q9UQR0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCML2Q9UQR0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCML2Q9UQR0 AC126177.7-201ENST00000547904 679 ntBASIC26.26■■□□□ 1.79
SCML2Q9UQR0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCML2Q9UQR0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCML2Q9UQR0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms