Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col13a1Q9R1N9 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.51■□□□□ 0.71
Col13a1Q9R1N9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col13a1Q9R1N9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.5■□□□□ 0.71
Col13a1Q9R1N9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col13a1Q9R1N9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.48■□□□□ 0.71
Col13a1Q9R1N9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col13a1Q9R1N9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.48■□□□□ 0.71
Col13a1Q9R1N9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.48■□□□□ 0.71
Col13a1Q9R1N9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col13a1Q9R1N9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col13a1Q9R1N9 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.47■□□□□ 0.71
Col13a1Q9R1N9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.47■□□□□ 0.71
Col13a1Q9R1N9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col13a1Q9R1N9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col13a1Q9R1N9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col13a1Q9R1N9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col13a1Q9R1N9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.46■□□□□ 0.71
Col13a1Q9R1N9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col13a1Q9R1N9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Col13a1Q9R1N9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col13a1Q9R1N9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col13a1Q9R1N9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col13a1Q9R1N9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col13a1Q9R1N9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col13a1Q9R1N9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col13a1Q9R1N9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col13a1Q9R1N9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col13a1Q9R1N9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.44■□□□□ 0.7
Col13a1Q9R1N9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col13a1Q9R1N9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.43■□□□□ 0.7
Col13a1Q9R1N9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col13a1Q9R1N9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 Gm37136-201ENSMUST00000194368 194 ntBASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Col13a1Q9R1N9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col13a1Q9R1N9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col13a1Q9R1N9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col13a1Q9R1N9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Col13a1Q9R1N9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col13a1Q9R1N9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col13a1Q9R1N9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col13a1Q9R1N9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col13a1Q9R1N9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col13a1Q9R1N9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Col13a1Q9R1N9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col13a1Q9R1N9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col13a1Q9R1N9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 Rps24-207ENSMUST00000224568 714 ntBASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col13a1Q9R1N9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col13a1Q9R1N9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col13a1Q9R1N9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.37■□□□□ 0.69
Col13a1Q9R1N9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col13a1Q9R1N9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col13a1Q9R1N9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.35■□□□□ 0.69
Col13a1Q9R1N9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.35■□□□□ 0.69
Col13a1Q9R1N9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.35■□□□□ 0.69
Col13a1Q9R1N9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.35■□□□□ 0.69
Col13a1Q9R1N9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col13a1Q9R1N9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col13a1Q9R1N9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col13a1Q9R1N9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col13a1Q9R1N9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col13a1Q9R1N9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col13a1Q9R1N9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col13a1Q9R1N9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Col13a1Q9R1N9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.33■□□□□ 0.68
Col13a1Q9R1N9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.33■□□□□ 0.68
Col13a1Q9R1N9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col13a1Q9R1N9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.32■□□□□ 0.68
Col13a1Q9R1N9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col13a1Q9R1N9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col13a1Q9R1N9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col13a1Q9R1N9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col13a1Q9R1N9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Col13a1Q9R1N9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col13a1Q9R1N9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col13a1Q9R1N9 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms