Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDC42SE2Q9NRR3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 WHAMMP2-203ENST00000563942 1603 ntBASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 AC108673.1-201ENST00000510422 1159 ntBASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.29■□□□□ 0.36
CDC42SE2Q9NRR3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42SE2Q9NRR3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42SE2Q9NRR3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.28■□□□□ 0.36
CDC42SE2Q9NRR3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42SE2Q9NRR3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDC42SE2Q9NRR3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
CDC42SE2Q9NRR3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CDC42SE2Q9NRR3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDC42SE2Q9NRR3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CDC42SE2Q9NRR3 AC091060.1-201ENST00000623524 1766 ntBASIC17.27■□□□□ 0.35
CDC42SE2Q9NRR3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDC42SE2Q9NRR3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.26■□□□□ 0.35
CDC42SE2Q9NRR3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC42SE2Q9NRR3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42SE2Q9NRR3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42SE2Q9NRR3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42SE2Q9NRR3 LINC00273-201ENST00000539813 1452 ntBASIC17.25■□□□□ 0.35
CDC42SE2Q9NRR3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42SE2Q9NRR3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.25■□□□□ 0.35
CDC42SE2Q9NRR3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CDC42SE2Q9NRR3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42SE2Q9NRR3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42SE2Q9NRR3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42SE2Q9NRR3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42SE2Q9NRR3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42SE2Q9NRR3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDC42SE2Q9NRR3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDC42SE2Q9NRR3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.22■□□□□ 0.35
CDC42SE2Q9NRR3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 SUZ12P1-203ENST00000578195 985 ntBASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 MIR6090-201ENST00000622481 60 ntBASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDC42SE2Q9NRR3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 AC135731.1-201ENST00000569415 2548 ntBASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC42SE2Q9NRR3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC42SE2Q9NRR3 AC145676.1-201ENST00000514988 2004 ntBASIC17.19■□□□□ 0.34
CDC42SE2Q9NRR3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC42SE2Q9NRR3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.17■□□□□ 0.34
CDC42SE2Q9NRR3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC42SE2Q9NRR3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CDC42SE2Q9NRR3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDC42SE2Q9NRR3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDC42SE2Q9NRR3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42SE2Q9NRR3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.16■□□□□ 0.34
CDC42SE2Q9NRR3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42SE2Q9NRR3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42SE2Q9NRR3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42SE2Q9NRR3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDC42SE2Q9NRR3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.15■□□□□ 0.34
CDC42SE2Q9NRR3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.14■□□□□ 0.33
CDC42SE2Q9NRR3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42SE2Q9NRR3 DUX4L28-201ENST00000623687 678 ntBASIC17.13■□□□□ 0.33
CDC42SE2Q9NRR3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDC42SE2Q9NRR3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDC42SE2Q9NRR3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms