Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 DMTF1-228ENST00000579850 3483 ntTSL 55.99□□□□□ -1.453e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-224ENST00000547146 3657 ntTSL 55.79□□□□□ -1.483e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-208ENST00000425406 3868 ntTSL 25.72□□□□□ -1.493e-6■□□□□ 9.6
DDX21Q9NR30 PRPF39-206ENST00000554429 2977 ntTSL 53.3□□□□□ -1.882e-13■□□□□ 9.6
DDX21Q9NR30 PRPF39-205ENST00000554081 3223 ntTSL 53.12□□□□□ -1.912e-13■□□□□ 9.6
DDX21Q9NR30 PRPF39-207ENST00000554439 2982 ntTSL 52.91□□□□□ -1.942e-13■□□□□ 9.6
DDX21Q9NR30 PRPF39-208ENST00000554785 2121 ntTSL 21.9□□□□□ -2.12e-13■□□□□ 9.6
DDX21Q9NR30 SNORD127-201ENST00000458892 86 ntBASIC1.82□□□□□ -2.122e-13■□□□□ 9.6
DDX21Q9NR30 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.86■■■□□ 2.852e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.36■■□□□ 1.652e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-203ENST00000519369 824 ntTSL 217.39■□□□□ 0.372e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.182e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-209ENST00000521289 737 ntTSL 514.55□□□□□ -0.082e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-212ENST00000618656 627 ntTSL 3 BASIC12.33□□□□□ -0.442e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-207ENST00000520627 423 ntTSL 5 BASIC12.16□□□□□ -0.462e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.632e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-204ENST00000519606 424 ntTSL 3 BASIC11.12□□□□□ -0.632e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-206ENST00000520490 402 ntTSL 310.41□□□□□ -0.742e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC9.79□□□□□ -0.842e-29■□□□□ 9.6
DDX21Q9NR30 RPS20-202ENST00000518875 671 ntTSL 2 BASIC9.32□□□□□ -0.922e-29■□□□□ 9.6
DDX21Q9NR30 SNORD54-201ENST00000459159 67 ntBASIC-1.25□□□□□ -2.612e-29■□□□□ 9.6
DDX21Q9NR30 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.547e-7■□□□□ 9.5
DDX21Q9NR30 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC10.72□□□□□ -0.694e-10■□□□□ 9.5
DDX21Q9NR30 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.53■■■□□ 2.484e-6■□□□□ 9.4
DDX21Q9NR30 DAZAP1-204ENST00000586579 619 ntTSL 329.45■■■□□ 2.314e-6■□□□□ 9.4
DDX21Q9NR30 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.01■■■□□ 2.234e-6■□□□□ 9.4
DDX21Q9NR30 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.034e-6■□□□□ 9.4
DDX21Q9NR30 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.814e-6■□□□□ 9.4
DDX21Q9NR30 DAZAP1-210ENST00000592453 1021 ntTSL 518.89■□□□□ 0.614e-6■□□□□ 9.4
DDX21Q9NR30 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.642e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.03■□□□□ 0.322e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-221ENST00000557432 642 ntTSL 316.94■□□□□ 0.32e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.172e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.82■□□□□ 0.122e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.58■□□□□ 0.082e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-217ENST00000555566 734 ntTSL 315.46■□□□□ 0.072e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.052e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC15.17■□□□□ 0.022e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-206ENST00000473758 3540 ntTSL 1 (best)13.64□□□□□ -0.232e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC13.27□□□□□ -0.282e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-214ENST00000555352 579 ntTSL 412.26□□□□□ -0.452e-6■□□□□ 9.3
DDX21Q9NR30 ACIN1-208ENST00000553721 610 ntTSL 311.26□□□□□ -0.612e-6■□□□□ 9.3
DDX21Q9NR30 EPB41L4A-AS1-202ENST00000427306 1367 ntTSL 230.43■■■□□ 2.461e-323■□□□□ 9.3
DDX21Q9NR30 EPB41L4A-AS1-203ENST00000442823 578 ntTSL 222.72■■□□□ 1.231e-323■□□□□ 9.3
DDX21Q9NR30 EPB41L4A-AS1-204ENST00000508590 292 ntTSL 322.5■■□□□ 1.191e-323■□□□□ 9.3
DDX21Q9NR30 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.86■□□□□ 0.451e-323■□□□□ 9.3
DDX21Q9NR30 SNORA13-201ENST00000458790 133 ntBASIC-0.7□□□□□ -2.521e-323■□□□□ 9.3
DDX21Q9NR30 BSG-209ENST00000574970 570 ntTSL 428.31■■■□□ 2.128e-7■□□□□ 9.2
DDX21Q9NR30 BSG-208ENST00000573784 559 ntTSL 424.95■■□□□ 1.588e-7■□□□□ 9.2
DDX21Q9NR30 BSG-212ENST00000590218 545 ntTSL 224.94■■□□□ 1.588e-7■□□□□ 9.2
DDX21Q9NR30 BSG-211ENST00000576984 544 ntTSL 424.22■■□□□ 1.478e-7■□□□□ 9.2
DDX21Q9NR30 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.238e-7■□□□□ 9.2
DDX21Q9NR30 BSG-207ENST00000573216 545 ntTSL 422.64■■□□□ 1.218e-7■□□□□ 9.2
DDX21Q9NR30 BSG-210ENST00000576925 611 ntTSL 222.64■■□□□ 1.218e-7■□□□□ 9.2
DDX21Q9NR30 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.71■■□□□ 1.078e-7■□□□□ 9.2
DDX21Q9NR30 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.5■■□□□ 1.038e-7■□□□□ 9.2
DDX21Q9NR30 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.5■■□□□ 1.038e-7■□□□□ 9.2
DDX21Q9NR30 DCP2-207ENST00000513585 1572 ntTSL 221.47■■□□□ 1.038e-7■□□□□ 9.2
DDX21Q9NR30 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.39■■□□□ 1.018e-7■□□□□ 9.2
DDX21Q9NR30 BSG-213ENST00000613627 689 ntTSL 320.28■□□□□ 0.848e-7■□□□□ 9.2
DDX21Q9NR30 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.26■□□□□ 0.838e-7■□□□□ 9.2
DDX21Q9NR30 BSG-206ENST00000572899 582 ntTSL 220.13■□□□□ 0.818e-7■□□□□ 9.2
DDX21Q9NR30 TLN1-203ENST00000464379 814 ntTSL 317.42■□□□□ 0.388e-7■□□□□ 9.2
DDX21Q9NR30 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.168e-7■□□□□ 9.2
DDX21Q9NR30 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC10.28□□□□□ -0.768e-7■□□□□ 9.2
DDX21Q9NR30 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.098e-7■□□□□ 9.2
DDX21Q9NR30 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.915e-8■□□□□ 9
DDX21Q9NR30 SPN-205ENST00000563039 1853 ntTSL 524.67■■□□□ 1.545e-8■□□□□ 9
DDX21Q9NR30 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.275e-8■□□□□ 9
DDX21Q9NR30 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.26e-10■□□□□ 9
DDX21Q9NR30 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.13■□□□□ 0.976e-10■□□□□ 9
DDX21Q9NR30 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.04■□□□□ 0.486e-10■□□□□ 9
DDX21Q9NR30 RPL37-202ENST00000504562 505 ntTSL 214.68□□□□□ -0.062e-29■□□□□ 9
DDX21Q9NR30 RPL37-205ENST00000509877 637 ntTSL 5 BASIC10.48□□□□□ -0.732e-29■□□□□ 9
DDX21Q9NR30 RPL37-203ENST00000507642 425 ntTSL 39.29□□□□□ -0.922e-29■□□□□ 9
DDX21Q9NR30 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.172e-29■□□□□ 9
DDX21Q9NR30 SNORD72-201ENST00000390994 80 ntBASIC1.66□□□□□ -2.142e-29■□□□□ 9
DDX21Q9NR30 RPL23A-208ENST00000580755 412 ntTSL 221.47■■□□□ 1.031e-51■□□□□ 9
DDX21Q9NR30 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.28■□□□□ 0.681e-51■□□□□ 9
DDX21Q9NR30 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.11e-51■□□□□ 9
DDX21Q9NR30 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC14.35□□□□□ -0.111e-51■□□□□ 9
DDX21Q9NR30 RPL23A-202ENST00000394935 580 ntTSL 312.73□□□□□ -0.371e-51■□□□□ 9
DDX21Q9NR30 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC10.12□□□□□ -0.791e-51■□□□□ 9
DDX21Q9NR30 RPL23A-201ENST00000355731 587 ntTSL 58.02□□□□□ -1.131e-51■□□□□ 9
DDX21Q9NR30 SNORD42A-201ENST00000459584 64 ntBASIC4.41□□□□□ -1.71e-51■□□□□ 9
DDX21Q9NR30 RPL23A-207ENST00000578181 593 ntTSL 24.21□□□□□ -1.741e-51■□□□□ 9
DDX21Q9NR30 CAP1-216ENST00000449311 681 ntTSL 522.37■■□□□ 1.171e-6■□□□□ 9
DDX21Q9NR30 CAP1-211ENST00000421589 824 ntTSL 221.18■□□□□ 0.981e-6■□□□□ 9
DDX21Q9NR30 AC024267.1-201ENST00000582320 895 ntBASIC20.87■□□□□ 0.931e-6■□□□□ 9
DDX21Q9NR30 CAP1-210ENST00000420216 668 ntTSL 518.94■□□□□ 0.621e-6■□□□□ 9
DDX21Q9NR30 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.481e-6■□□□□ 9
DDX21Q9NR30 CAP1-208ENST00000414893 528 ntTSL 317.91■□□□□ 0.461e-6■□□□□ 9
DDX21Q9NR30 CAP1-209ENST00000417287 610 ntTSL 516.73■□□□□ 0.271e-6■□□□□ 9
DDX21Q9NR30 CAP1-214ENST00000435719 817 ntTSL 316.62■□□□□ 0.251e-6■□□□□ 9
DDX21Q9NR30 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.241e-6■□□□□ 9
DDX21Q9NR30 CAP1-207ENST00000414281 772 ntTSL 414.73□□□□□ -0.051e-6■□□□□ 9
DDX21Q9NR30 CAP1-215ENST00000446031 273 ntTSL 314.64□□□□□ -0.071e-6■□□□□ 9
DDX21Q9NR30 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.11e-6■□□□□ 9
DDX21Q9NR30 CAP1-213ENST00000427843 739 ntTSL 513.19□□□□□ -0.31e-6■□□□□ 9
DDX21Q9NR30 CAP1-202ENST00000372792 1496 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.341e-6■□□□□ 9
Retrieved 100 of 1,140 protein–RNA pairs in 117.9 ms