Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herpud1Q9JJK5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herpud1Q9JJK5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Herpud1Q9JJK5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Herpud1Q9JJK5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Herpud1Q9JJK5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Herpud1Q9JJK5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Herpud1Q9JJK5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Herpud1Q9JJK5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Herpud1Q9JJK5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Herpud1Q9JJK5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herpud1Q9JJK5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.96■□□□□ 0.63
Herpud1Q9JJK5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Herpud1Q9JJK5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herpud1Q9JJK5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.95■□□□□ 0.62
Herpud1Q9JJK5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Herpud1Q9JJK5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Herpud1Q9JJK5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Herpud1Q9JJK5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herpud1Q9JJK5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.94■□□□□ 0.62
Herpud1Q9JJK5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herpud1Q9JJK5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Herpud1Q9JJK5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herpud1Q9JJK5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herpud1Q9JJK5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herpud1Q9JJK5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herpud1Q9JJK5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.93■□□□□ 0.62
Herpud1Q9JJK5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Herpud1Q9JJK5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herpud1Q9JJK5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herpud1Q9JJK5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Herpud1Q9JJK5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herpud1Q9JJK5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herpud1Q9JJK5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Herpud1Q9JJK5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herpud1Q9JJK5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Herpud1Q9JJK5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Herpud1Q9JJK5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herpud1Q9JJK5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Herpud1Q9JJK5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herpud1Q9JJK5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herpud1Q9JJK5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Herpud1Q9JJK5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herpud1Q9JJK5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Herpud1Q9JJK5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Herpud1Q9JJK5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Herpud1Q9JJK5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Herpud1Q9JJK5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Herpud1Q9JJK5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herpud1Q9JJK5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herpud1Q9JJK5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.88■□□□□ 0.61
Herpud1Q9JJK5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Herpud1Q9JJK5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Herpud1Q9JJK5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.86■□□□□ 0.61
Herpud1Q9JJK5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Herpud1Q9JJK5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Herpud1Q9JJK5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Herpud1Q9JJK5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.84■□□□□ 0.61
Herpud1Q9JJK5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Herpud1Q9JJK5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Herpud1Q9JJK5 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.84■□□□□ 0.61
Herpud1Q9JJK5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Herpud1Q9JJK5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 Gm37136-201ENSMUST00000194368 194 ntBASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Herpud1Q9JJK5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herpud1Q9JJK5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herpud1Q9JJK5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herpud1Q9JJK5 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.82■□□□□ 0.6
Herpud1Q9JJK5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Herpud1Q9JJK5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms