Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssna1Q9JJ94 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssna1Q9JJ94 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssna1Q9JJ94 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssna1Q9JJ94 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ssna1Q9JJ94 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssna1Q9JJ94 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ssna1Q9JJ94 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ssna1Q9JJ94 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.82■□□□□ 0.6
Ssna1Q9JJ94 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Ssna1Q9JJ94 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssna1Q9JJ94 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssna1Q9JJ94 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.81■□□□□ 0.6
Ssna1Q9JJ94 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssna1Q9JJ94 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssna1Q9JJ94 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssna1Q9JJ94 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.8■□□□□ 0.6
Ssna1Q9JJ94 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssna1Q9JJ94 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssna1Q9JJ94 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssna1Q9JJ94 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssna1Q9JJ94 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ssna1Q9JJ94 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssna1Q9JJ94 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssna1Q9JJ94 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssna1Q9JJ94 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssna1Q9JJ94 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssna1Q9JJ94 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssna1Q9JJ94 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssna1Q9JJ94 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssna1Q9JJ94 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ssna1Q9JJ94 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Ssna1Q9JJ94 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssna1Q9JJ94 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssna1Q9JJ94 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssna1Q9JJ94 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.76■□□□□ 0.59
Ssna1Q9JJ94 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ssna1Q9JJ94 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssna1Q9JJ94 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssna1Q9JJ94 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssna1Q9JJ94 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ssna1Q9JJ94 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssna1Q9JJ94 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ssna1Q9JJ94 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ssna1Q9JJ94 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssna1Q9JJ94 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssna1Q9JJ94 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ssna1Q9JJ94 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssna1Q9JJ94 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssna1Q9JJ94 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssna1Q9JJ94 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssna1Q9JJ94 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssna1Q9JJ94 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssna1Q9JJ94 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssna1Q9JJ94 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssna1Q9JJ94 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssna1Q9JJ94 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssna1Q9JJ94 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ssna1Q9JJ94 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssna1Q9JJ94 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssna1Q9JJ94 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssna1Q9JJ94 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ssna1Q9JJ94 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssna1Q9JJ94 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.69■□□□□ 0.58
Ssna1Q9JJ94 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssna1Q9JJ94 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssna1Q9JJ94 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssna1Q9JJ94 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ssna1Q9JJ94 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssna1Q9JJ94 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssna1Q9JJ94 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ssna1Q9JJ94 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssna1Q9JJ94 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ssna1Q9JJ94 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssna1Q9JJ94 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssna1Q9JJ94 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ssna1Q9JJ94 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssna1Q9JJ94 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssna1Q9JJ94 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssna1Q9JJ94 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ssna1Q9JJ94 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ssna1Q9JJ94 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssna1Q9JJ94 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssna1Q9JJ94 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ssna1Q9JJ94 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ssna1Q9JJ94 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ssna1Q9JJ94 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ssna1Q9JJ94 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.63■□□□□ 0.57
Ssna1Q9JJ94 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssna1Q9JJ94 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssna1Q9JJ94 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssna1Q9JJ94 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ssna1Q9JJ94 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms