Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 MIR3665-201ENST00000578708 105 ntBASIC24.33■■□□□ 1.49
TUBB1Q9H4B7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TUBB1Q9H4B7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TUBB1Q9H4B7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TUBB1Q9H4B7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TUBB1Q9H4B7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TUBB1Q9H4B7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TUBB1Q9H4B7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TUBB1Q9H4B7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.3■■□□□ 1.48
TUBB1Q9H4B7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
TUBB1Q9H4B7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TUBB1Q9H4B7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TUBB1Q9H4B7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.29■■□□□ 1.48
TUBB1Q9H4B7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TUBB1Q9H4B7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.29■■□□□ 1.48
TUBB1Q9H4B7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TUBB1Q9H4B7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TUBB1Q9H4B7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TUBB1Q9H4B7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TUBB1Q9H4B7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TUBB1Q9H4B7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
TUBB1Q9H4B7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
TUBB1Q9H4B7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TUBB1Q9H4B7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.25■■□□□ 1.47
TUBB1Q9H4B7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TUBB1Q9H4B7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TUBB1Q9H4B7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.24■■□□□ 1.47
TUBB1Q9H4B7 AL449106.1-201ENST00000608517 1980 ntBASIC24.24■■□□□ 1.47
TUBB1Q9H4B7 AP006261.1-201ENST00000584783 668 ntBASIC24.24■■□□□ 1.47
TUBB1Q9H4B7 AC087741.3-201ENST00000624270 1347 ntBASIC24.24■■□□□ 1.47
TUBB1Q9H4B7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TUBB1Q9H4B7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TUBB1Q9H4B7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TUBB1Q9H4B7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.23■■□□□ 1.47
TUBB1Q9H4B7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TUBB1Q9H4B7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
TUBB1Q9H4B7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.22■■□□□ 1.47
TUBB1Q9H4B7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TUBB1Q9H4B7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.22■■□□□ 1.47
TUBB1Q9H4B7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.22■■□□□ 1.47
TUBB1Q9H4B7 AC091060.1-201ENST00000623524 1766 ntBASIC24.21■■□□□ 1.47
TUBB1Q9H4B7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.21■■□□□ 1.47
TUBB1Q9H4B7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.21■■□□□ 1.47
TUBB1Q9H4B7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TUBB1Q9H4B7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
TUBB1Q9H4B7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TUBB1Q9H4B7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.2■■□□□ 1.46
TUBB1Q9H4B7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.19■■□□□ 1.46
TUBB1Q9H4B7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.18■■□□□ 1.46
TUBB1Q9H4B7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.18■■□□□ 1.46
TUBB1Q9H4B7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TUBB1Q9H4B7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TUBB1Q9H4B7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 AL162393.1-201ENST00000437852 946 ntBASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
TUBB1Q9H4B7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.16■■□□□ 1.46
TUBB1Q9H4B7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TUBB1Q9H4B7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TUBB1Q9H4B7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
TUBB1Q9H4B7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.16■■□□□ 1.46
TUBB1Q9H4B7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TUBB1Q9H4B7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TUBB1Q9H4B7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.15■■□□□ 1.46
TUBB1Q9H4B7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TUBB1Q9H4B7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TUBB1Q9H4B7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TUBB1Q9H4B7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
TUBB1Q9H4B7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.13■■□□□ 1.45
TUBB1Q9H4B7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TUBB1Q9H4B7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.13■■□□□ 1.45
TUBB1Q9H4B7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TUBB1Q9H4B7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TUBB1Q9H4B7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TUBB1Q9H4B7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TUBB1Q9H4B7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TUBB1Q9H4B7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TUBB1Q9H4B7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TUBB1Q9H4B7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
TUBB1Q9H4B7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TUBB1Q9H4B7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.11■■□□□ 1.45
TUBB1Q9H4B7 AC110285.7-201ENST00000624417 1536 ntBASIC24.1■■□□□ 1.45
TUBB1Q9H4B7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TUBB1Q9H4B7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.09■■□□□ 1.45
TUBB1Q9H4B7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TUBB1Q9H4B7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.08■■□□□ 1.45
TUBB1Q9H4B7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
TUBB1Q9H4B7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.08■■□□□ 1.45
TUBB1Q9H4B7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TUBB1Q9H4B7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.08■■□□□ 1.44
TUBB1Q9H4B7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms